box_plot                Box plot support two levels and multiple groups
                        with P value.
chord_plot              Chord plot for visualizing the relationships of
                        pathways and genes.
circos_heatmap          Circos heatmap plot for visualizing gene
                        expressing in multiple samples.
corr_heatmap            Correlation Heatmap for samples/groups based on
                        Pearson algorithm.
degs_lists              Paired comparisons differentially expressed
                        genes (degs) among groups.
degs_stats              All DEGs of paired comparison CT-vs-LT12 stats
                        dataframe.
degs_stats2             All DEGs of paired comparison CT-vs-LT12 stats2
                        dataframe.
dendro_plot             Dendrograms for multiple samples/groups
                        clustering.
flower_plot             Flower plot for stat common and unique gene
                        among multiple sets.
gene_cluster_trend      Gene cluster trend plot for visualizing gene
                        expression trend profile in multiple samples.
gene_expression         All genes in all samples expression dataframe
                        of RNA-Seq.
gene_expression2        Shared DEGs of all paired comparisons in all
                        samples expression dataframe of RNA-Seq.
gene_expression3        Shared DEGs of all paired comparisons in all
                        groups expression dataframe of RNA-Seq.
gene_go_kegg            GO and KEGG annotation of background genes.
gene_go_kegg2           GO and KEGG annotation of background genes.
gene_rank_plot          Gene ranking dotplot for visualizing
                        differentailly expressed genes.
go_enrich               GO enrichment analysis based on GO annotation
                        results (None/Exist Reference Genome).
go_enrich_bar           GO enrichment analysis and bar plot (None/Exist
                        Reference Genome).
go_enrich_dot           GO enrichment analysis and dot plot (None/Exist
                        Reference Genome).
go_enrich_net           GO enrichment analysis and net plot (None/Exist
                        Reference Genome).
go_enrich_stat          GO enrichment analysis and stat plot
                        (None/Exist Reference Genome).
heatmap_cluster         Heatmap cluster for visualizing clustered gene
                        expression data.
heatmap_group           Heatmap group for visualizing grouped gene
                        expression data.
kegg_enrich             KEGG enrichment analysis based on KEGG
                        annotation results (None/Exist Reference
                        Genome).
kegg_enrich_bar         KEGG enrichment analysis and bar plot
                        (None/Exist Reference Genome).
kegg_enrich_dot         KEGG enrichment analysis and dot plot
                        (None/Exist Reference Genome).
kegg_enrich_net         KEGG enrichment analysis and net plot
                        (None/Exist Reference Genome).
ma_plot                 MversusA plot for visualizing differentially
                        expressed genes.
network_data            Network data from WGCNA tan module top-200
                        dataframe.
network_plot            Network plot for analyzing and visualizing
                        relationship of genes.
pca_analysis            PCA dimensional reduction analysis for RNA-Seq.
pca_plot                PCA dimensional reduction visualization for
                        RNA-Seq.
quantile_plot           Quantile plot for visualizing data
                        distribution.
samples_groups          Samples and groups for gene expression.
survival_data           Survival data as example data for survival_plot
                        function.
survival_plot           Survival plot for analyzing and visualizing
                        survival data.
table_cross             Table cross used to cross search and merge
                        results in two tables.
table_filter            Table filter used to filter row by column
                        condition.
table_merge             Table merge used to merge multiple variables to
                        on variable.
table_split             Table split used for splitting a grouped column
                        to multiple columns.
tomicsvis               TOmicsVis shiny app start function.
traits_sex              Length, Width, Weight, and Sex traits
                        dataframe.
trend_plot              Trend plot for visualizing gene expression
                        trend profile in multiple traits.
tsne_analysis           TSNE analysis for analyzing and visualizing
                        TSNE algorithm.
tsne_plot               TSNE plot for analyzing and visualizing TSNE
                        algorithm.
umap_analysis           UMAP analysis for analyzing RNA-Seq data.
umap_plot               UMAP plot for analyzing and visualizing UMAP
                        algorithm.
upsetr_plot             UpSet plot for stat common and unique gene
                        among multiple sets.
venn_plot               Venn plot for stat common and unique gene among
                        multiple sets.
violin_plot             Violin plot support two levels and multiple
                        groups with P value.
volcano_plot            Volcano plot for visualizing differentailly
                        expressed genes.
weight_sex              Weight and Sex traits dataframe.
wgcna_pipeline          WGCNA analysis pipeline for RNA-Seq.
