0dee60a1a4c9d4144f52a40923bb6e97 *CITATION
a9d6797ad11b17440fb03444dffd380f *DESCRIPTION
d1029bae68b758c659e8e526627c5b32 *INDEX
67a7574c84866c28b74e03cab0bb2f7c *Meta/Rd.rds
86d0636b4c700e416386835098fcba6f *Meta/features.rds
bee4c6cd467127d0b12b8b389c2f6b89 *Meta/hsearch.rds
1f3c7a655f01034ab87cf086833c9879 *Meta/links.rds
facc073baba6fcd52a94549b7a9523a5 *Meta/nsInfo.rds
f93a6722f0f17767ccc4cec3d882c355 *Meta/package.rds
019bfae583b9c415cfc0980e414a3cf7 *Meta/vignette.rds
df06ed7b61c5ae0468472fad8dcf7c8a *NAMESPACE
934e2839ac179f85729a272bff06d7cd *NEWS.md
d6c68f1fe41ced6e98a766a3757313da *R/jointseg
c89d51a353493d8b8c8e4f766819e946 *R/jointseg.rdb
76b1a75e715c610cc6ebf48966ed334d *R/jointseg.rdx
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b244801e92d6768a7d941ff072ef26e4 *doc/dataGeneration.html
2d5cf441261af9d9d16cd7ec43444e0d *doc/index.html
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33d3f122044f34134f4e42a85590b9db *eval/GSE11976/01.createDataSets.R
ddbcea24ceb0a98cb7551fd9bf7e82b2 *eval/GSE11976/02a.RBS+DP.R
cf6bd3e00445b5824e24342bcea7e40d *eval/GSE11976/02c.cghseg.R
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bc237341fb1eaaccd4760a239e8a4625 *eval/GSE11976/03.perf.R
861cc155c17add871b2238abeb018513 *eval/GSE11976/04.pAUC.R
937ef4eeded0f01ed2a708f0ebd61ec6 *eval/GSE11976/05.pAUCcurves.R
0fe3b1fd9b2105d0f4ca6724f5aa6abd *eval/GSE11976/06.pAUCtable.R
b6dd68cae4936541810e0b9ccf13d7f9 *eval/GSE11976/SnrForCaughtAndMissedBkp.R
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9229147abda9e370fd4652ae303a06ac *eval/GSE29172/00.setup.R
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7e8577834e4f6af6da3c391236b4eba2 *eval/GSE29172/02d.CBS.R
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3a791f9ebd40c2f50b5aa419b6552033 *eval/GSE29172/02f.GFLars.R
cd644ec2205637d7e0ab7f3ddd45ca41 *eval/GSE29172/03.perf.R
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0fe3b1fd9b2105d0f4ca6724f5aa6abd *eval/GSE29172/06.pAUCtable.R
29a840b607f753a3e124aa0ce369778a *eval/GSE29172/SnrForCaughtAndMissedBkp.R
5c7a5762381a653299c02ca5eb558633 *eval/GSE29172/myImagePlot.R
2e9065ed5f629521a95a08bce1d26320 *figures/SNR.R
b8a6775e2f72a16b02d7da6d0e0e04e7 *figures/cnProfiles.tex
81a1fa9dec6517692ed46f83b972ec9f *figures/copyNumberData.R
5e54c339510c0000d7aeca217975a307 *figures/evalTPFP.R
3abd730defc3245073ad949bc016874a *help/AnIndex
05582780d68fcecb5b13f9771c0f2ac7 *help/aliases.rds
66b64f3ac4e7d7e33608ea5fe6cdc6a8 *help/jointseg.rdb
4da77978a2953613ab9943b26e8b4a46 *help/jointseg.rdx
578142d9db70afde8957da32e4733637 *help/paths.rds
f4fa8ddc2bb864cb18421567e3983f51 *html/00Index.html
8b9362669af13540a86a3ac6cf22f99d *html/R.css
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a9c25c4a24a1e67b1d44118be3852c16 *libs/x64/symbols.rds
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a71fee701471285b9cdf89c6ed34c310 *otherMethods/ASCAT/downloadASCAT.R
4eda24bfb0f64092c8ace0186457120a *otherMethods/ASCAT/predictGG.R
0da62f9d3fa63573f4afa3e92807a0bf *otherMethods/ASCAT/runASCAT.R
f0364b90725f6b74a587d5d32adc26c0 *otherMethods/CnaStruct/doCnaStruct.R
450d0e4ddc2da90c980019c06b9d3fa7 *otherMethods/PELT/doPelt.R
805f60af19e84ecc88fe039767087cea *otherMethods/PELT/doPelt.Rnw
9706ccf72df147e67f45f053ead9c813 *otherMethods/PELT/jointSeg.bib
4fc133e2a41ba60fe7bd71d04389ddec *otherMethods/PSCN/doPSCN.R
576e5c1062b0f72c0f63862d2d833144 *syntheticProfiles/customRegionProba.R
141f73950466990ba59318c52d407f89 *syntheticProfiles/firestorm.R
1d3eb0d57a4734817a83e642b567e6c7 *syntheticProfiles/sawtooth.R
750d136d3be4c6edb19abe3bad594050 *time/00.setup.R
750d136d3be4c6edb19abe3bad594050 *time/R/00.setup.R
3dde4bdfb649545b2d14c150500cb37e *time/R/01.createDataSets.R
9cf527e7c9c9ea19533979d00fc88d4b *time/R/02a.RBS+DP.R
6d2073cfb4aa9bbdc2a3adfb28581f04 *time/R/02b.PSCN.R
8464e7b69446a2c0d1c6e279fcbf794f *time/R/02c.cghseg.R
2d1785c7a8f4d4647fa303eb84da4892 *time/R/02d.CBS.R
2637f32c2fee9f515c648dd08bfbe472 *time/R/02e.PSCBS.R
06d28fd63ba28809f5e3e3bf7cf8ad98 *time/R/02f.GFLars.R
0e1f1a9c8aba26603074e252fe63d213 *time/R/02g.CnaStruct.R
75347a197bf569c823241506cab46de9 *time/R/02i.DPSeg2d.R
793f39d6a5c8b1690ddf032e7e8c8b1b *time/R/Script.R
