f5f4895f31ef95d91efeb6697e73155d *DESCRIPTION
df390c53434517b304ac5db487184641 *NAMESPACE
241ed05c9752f8b6898c7707e43443d6 *R/buildTree.R
a18b9b23776018b1ef9e7035179938af *R/checkTreeValidity.R
332916cb54868e4e8f902f1e831b72ae *R/checkValidHelp.R
35cc9371d0f8880a3c3773012e6d2910 *R/compareTwoDataSets.R
ec6ef021764b61e37fda2a697a950e5b *R/createAndPlot.R
e086cbaad27140b0f44f0ac4ca6158f3 *R/createTrees.R
b2874ebf627d87fc5e783e0c0e64ae52 *R/displayLegend.R
29af701a2c5f06511670db4f125e6b5e *R/formatData.R
612dcfd455aa14558affd67043da93ab *R/generateTree.R
9518c15e39732726f7545de374d17018 *R/getBranchSizes.R
be9280d73d14ec19e9b9e0c49940b7e8 *R/getMLEandLoglike.R
85d6446007e566a19088016804092f00 *R/getTaxaDepth.R
483903dba59d84e5e06b687f0707c465 *R/helpBuildTree.R
a3f620a9a2f21449b9ee350b22eeab3a *R/mergeDataSets.R
79dd1f1d0bad5c2957d24b016b66aad3 *R/plotTree.R
4f38f910c413d46747a8d5ad17d8d8fc *R/plotTreeDataMDS.R
a957bad9fc2a614125598e4a2e826c92 *R/rowMatch.R
91aef40ec55cece910580948c5ef0725 *R/subsetData.R
3f2a88808d54873621b873c3c7306daa *R/transformHMPTreetoHMP.R
45071585b1b272d1cf10a55e8a03234b *R/transformHMPtoHMPTree.R
b0b65eb03592d19b13da0d6d4530a79d *R/traverseHelp.R
3c0c0275fdb8dfd97df1898e3f0ca0e0 *R/traverseTree.R
d4c02dc3e264a15dc9a7963d856deda6 *R/trimToTaxaLevel.R
4ed4cd869039d1e65aaf95295898a1bd *data/saliva.rda
21517f3b3b34bbc18bb1572717258d23 *data/stool.rda
1073f4b16969d55f99dc72196f55f23a *data/throat.rda
c10f949c5e19396658c4f1fe0340fa13 *man/HMPTrees-internal.Rd
1f9c70a3e7e12036dfaf98c898c78b0e *man/HMPTrees-package.Rd
bd5cd85694984293d55f4732da1cbff2 *man/checkTreeValidity.Rd
33f54b733048d30cba06b1f2d3f35b72 *man/compareTwoDataSets.Rd
01b3263440c000f65c6a54b8ad801725 *man/createAndPlot.Rd
c7eb326ac563a961cffad3f3125bce56 *man/createTrees.Rd
2bbfbc7b3311e0938be5ea24bf3eed60 *man/displayLegend.Rd
d48ae5d160f7822b9ccb1171cff33bcb *man/formatData.Rd
64630d398d053c4e13469341e5554fb4 *man/generateTree.Rd
ebbb632b8d49662c48c9a07635500d9f *man/getMLEandLoglike.Rd
f4306f063992df2b65a36d12a40819df *man/mergeDataSets.Rd
563be871bd8219eceacefa7f691957f5 *man/plotTree.Rd
726f3a347224dfc63fde5251f8c08161 *man/plotTreeDataMDS.Rd
a7d45aa765bf69f10b992aebfe750384 *man/saliva.Rd
04a616660bb4000f59173c8e760871b1 *man/stool.Rd
6a1d1a23893b0e7668ee6508b5d854c6 *man/throat.Rd
4c960680e1af65c0561c8acf80065d7d *man/transformHMPTreetoHMP.Rd
ef9db7785ebea6276ef8c49afa54642c *man/transformHMPtoHMPTree.Rd
7ed59571f500c716cddf96ef945e9c0f *man/trimToTaxaLevel.Rd
