e7dddd4494e8b3a17f7ea8d815ee80ce *DESCRIPTION
3a4f53f6181dd8e56da45eb4d7aaa50d *LICENSE
c63942e3a8f9159323b2b2019bd54309 *NAMESPACE
9698d2ce70eba43c1bf3e3064da57126 *NEWS.md
4d46a28b1931b32d25bc564107bc8738 *R/MALDIassay_Class.R
216601d2ce41aa16b143b35c6ec1b88d *R/aggregateSpectra.R
da84a40831fc753f5b022c0145365b21 *R/calculateChauvenetCriterion.R
d063034ccbbcb6128b46109fe12ebb69 *R/calculateCurveFit.R
f541e7ea4561cacfbaaa2fda1fbdb37a *R/calculatePeakstatistics.R
aa4edc7e9272cb3f732d7a9af89eabd1 *R/checkRecalibration.R
4170f5577157aaf4ba3ae58ac28b29f9 *R/detectPeaks.R
4d66e13737db9081dc2a58f30d580cf2 *R/example_data.R
e573bf2837de5d2ce7f5fba0ea191e8a *R/extractIntensity.R
ca7feff1eeee89fde2465671afa53b7d *R/extractSpots.R
dc5e4d428fbe97b4833c249880323d64 *R/filterVariance.R
ac3952db384685942c59baf33b2f4506 *R/fitCurve.R
c9e868c0b8282bd130650cb4ec9f97ab *R/getEstimates.R
35aa242816ddb533e6880b48281c98ba *R/getMzShift.R
799626948e53bfba5f1132385a346819 *R/getNormFactors.R
2f4c563f4df9aad94856a12f78470a45 *R/getters.R
7f0c6ceea98cabc3ddde847098848aef *R/helpers.R
5d94640f550d29027b348e9be283b45c *R/loadSpectra.R
9673cd9799035eac3d1787bc39925b91 *R/normalize.R
430df601ebbff38b552aad43e96ef53e *R/normalizeByFactor.R
c03148ffe0e27417cbcec8e15b9deaee *R/peaks2df.R
83004b82eaad4763981ab4a44a8c3bac *R/plotCurves.R
650779742e8ea5b4fbe7f70638b57659 *R/plotPeak.R
943e1ef1b5193f2ac117ca1d6c21c0fe *R/preprocess.R
20298f64f054a71388496184ecb46933 *R/qualitiyMetrics.R
31bf85c12a635bdbb01e87c11e9fa7db *R/repairMetaData.R
b093121ad6b5ca1e4a0aefcfe660ab53 *R/sdMassSpectrum.R
e6076448fc9f60b0b2539b5f9cee8f5e *R/shiftMassAxis.R
d3d436017b79a5e160a6425cef791c89 *R/stabilizeVariance.R
0dd7d4e4dd41bbadd9b9769c63e9edcd *README.md
94bcea03f312413c9978a22936726881 *build/vignette.rds
ac4771faa7811eb8f099345d1f6d3a06 *data/Blank2022intmat.rda
44c210f0f43816c8a2a35a7abdee3135 *data/Blank2022peaks.rda
33d07ed37bc34cecf2dd54f1160a13b3 *data/Blank2022res.rda
72a116c749f537c16cc6a1e817266e77 *data/Blank2022spec.rda
29597557d5dca1e271f4258cff214db2 *inst/doc/Example.R
f7edf9582a85fd41a0e2fa1430568a80 *inst/doc/Example.Rmd
92a652f8ad514647da42d3be6a489075 *inst/doc/Example.html
a24e094a6e1ba2db7d7b03f98df3e1c2 *inst/extdata/Koch2024mzML/0.0001.mzML
9e8a1dd4e8eaef67a4bb36b131918a51 *inst/extdata/example-raw-spectra.zip
45fc75a007c10a6bd07daa0c2a8f305b *man/Blank2022intmat.Rd
5312f82ba3e4d14c6d4d5aee9c685cd7 *man/Blank2022peaks.Rd
8318963f51d4b606fc60261be8b88561 *man/Blank2022res.Rd
cffe819502ddff40952fb290cbfd76e3 *man/Blank2022spec.Rd
76c18315a438f57fc1562ff2d123e493 *man/MALDIassay-class.Rd
d614f00815d4cb714b868575519edee6 *man/calculateChauvenetCriterion.Rd
98739943bd2c5b50a7064c91d91e641a *man/calculateCurveFit.Rd
430a37a8a2b6c84f8660059f20b6dc7c *man/calculatePeakStatistics.Rd
710a30b2825b3f7cca0502758992b73f *man/calculateSSMD.Rd
5b60d54c03a379a7db83b4d614024425 *man/calculateVPrime.Rd
8003275976f15372543b714b902f3ae4 *man/calculateZPrime.Rd
01a7f29abda33c39868602dff699809f *man/checkRecalibration.Rd
ee7d09d76af175f1e97987c85651fe85 *man/extractIntensity.Rd
f96f258757463fcda228f7eb8d1640d9 *man/extractSpots.Rd
948442a13cbae940760271f082709dee *man/filterVariance.Rd
f24f02deb0b28637657c1e88ccde8702 *man/fitCurve.Rd
8e8eb3bbcc4599fe634fd2d93518ae28 *man/getAllMz.Rd
b311ed69be8e3d45e684f36df68eb46b *man/getAppliedMzShift.Rd
6268db09b699a10717b5910e77730332 *man/getAppliedNormFactors.Rd
f2cbffde442d6935f67611a8580f791b *man/getAvgPeaks.Rd
339e0a92c557b59719845adf003919de *man/getAvgSpectra.Rd
3de518e9b07e289ac3a632efeeb07d00 *man/getBinTol.Rd
77773bbc7e362b54b011e13d895d950d *man/getConc.Rd
418d8a27498981b9bb5feb08a717008f *man/getCurveFits.Rd
7d439bad0e7488f9f05b78a54167561e *man/getDirectory.Rd
b048a8f6e297a47ed6dcffc74ede75f9 *man/getFittingParameters.Rd
afce50c3ba21a66c3e6ea9f408d5f0e3 *man/getIntensityMatrix.Rd
602ad14950816c8eaca779fed1bdf490 *man/getMzFromMzIdx.Rd
a9c71975e72e0e60780b38bf5a2e0507 *man/getMzShift.Rd
54a86254a498d2f0465a3696b69b24f2 *man/getNormFactors.Rd
139a46f4012fb1c97dc8e0b93f12133b *man/getNormMethod.Rd
54ba21d487b579aa47e8f06d0c2a3e0a *man/getNormMz.Rd
75f0fea3fe55b5d289ecb44606e9d297 *man/getNormMzTol.Rd
54294b9afc855ef07e1dc6e52f30f63f *man/getPeakStatistics.Rd
fa4c7732630cacdf708de6dca03fe3b8 *man/getRecalibrationError.Rd
a2578314656149c77a3e88b43af43158 *man/getSNR.Rd
e79168496600a5a0eb84d4a40d9782a3 *man/getSinglePeaks.Rd
bfb8ed6716269b4d8e9cceba4e3bea50 *man/getSingleSpecIntensity.Rd
62fe68488ade25acb3fc40dcf0a0ddac *man/getSpots.Rd
65a8e2a85997afbb769abd42f5c9aa02 *man/getVarFilterMethod.Rd
f124498226d325f90d19cd494e12e8de *man/isMALDIassay.Rd
bdfdda8158255c0fe56e1deb4fd6d013 *man/loadSpectra.Rd
969ee4e9b6d2cb24e8950f3938529eef *man/loadSpectraMzML.Rd
aaca7d5ecf842e27f1d7c956d2d460a7 *man/normalize.Rd
f1f65b3c5d6b3697e76058e29523673b *man/normalizeByFactor.Rd
b354f11ea313993fa008e4241de309f2 *man/peaks2df.Rd
c93a49cddacc83ff01239d099832d99a *man/plotCurves.Rd
adbaee5d1b130aa856b8fdc99da5df51 *man/plotPeak.Rd
6461b13f731e4859c3c2e76cf0067b2b *man/sdMassSpectrum.Rd
eb81cb970bbaa85f1be4ce63d532e7e2 *man/shiftMassAxis.Rd
ed2437ce307bd630975f07ea0309446f *man/transformConc2Log.Rd
f7edf9582a85fd41a0e2fa1430568a80 *vignettes/Example.Rmd
