e7f0d56eca5d08b643a6a59c2572759e *DESCRIPTION
c43f852aee21de16c525bb53f3743522 *NAMESPACE
347c290434ef6039e5c6614254cefb5e *R/Asiaadj.R
f9e25e1f4620a14fc8cd64d1757ee00d *R/DBNdata.R
a2328730379f776b1ca6f379b381a731 *R/DBNfns.R
311a4723278b29730468a6fec575bab4 *R/DBNmat.R
60c0309553530c4274ef8b013c79f32c *R/DBNunrolled.R
750c84509207a047952735b99b808d50 *R/KIRC.R
accff8ef620225c989a53ae979c45837 *R/KIRP.R
c88932e1dea0bff381e488202a53085b *R/RcppExports.R
541743ef6ee53651b4423c44ba817d02 *R/WeightedCI.R
da35c163b8cb4c6c8fb088df38907ca2 *R/corescore.R
b680e369c421ee24ae10db19c88bcaa9 *R/dataSTRING.R
c40524a68ba5f42c2ae0e66c18e0758b *R/extractors.R
117a6f21b9ea5b660a3ef70e81afee80 *R/graphhelpfns.R
255ff79713cfcef6d327299d2572c72c *R/gsimadj.R
a867557cc2ab7b4568917a1bf7a8694a *R/initpar.R
23d5b2dafc885e34c7d104ddd25c17c8 *R/iterativeMCMC.R
7a188e561d043c63222975effab4a307 *R/learningdata.R
e95b64ed8e8c462d368653946a7bb3c8 *R/main.R
ca99115051734d9bb9eabfa0e052c00e *R/newbinaryscoring.R
891f77ac2b7ff990ddba4b3afb200f10 *R/newcatscoring.R
e2e20fc782055287fa1ef45234853138 *R/orderMCMCbase.R
e400fbc0844579502f7e1993637054f6 *R/orderMCMCbasemax.R
623044f712f96aa8d0d5f57abf2435cc *R/orderMCMCmain.R
50d00047b266bef68471dae62d5a8b32 *R/orderMCMCplus1.R
0fd7466dc2e3fc09b0d5f0286450194a *R/orderMCMCplus1max.R
c3130601235030dc6c6415bf68956f10 *R/orderposetfns.R
7081287e3d52ef5129e1110d4a183b92 *R/orderscore.R
3af898a221ca0bb54cb6143f218378ad *R/orderscoremax.R
39d239765aad4c7582dc302afc9df1d5 *R/other.R
2e7b93ac458b5c29a601d29a12fb7a7b *R/othercnstr.R
4ed3686b190d25a96c475008574df5eb *R/partitionMCMC.R
b92219142d3942f112492fd430dac764 *R/partitionMCMCmain.R
464523727e35eef2c3317b61af2ad95c *R/partitionfns.R
c4f4a1c9b883f56e623bcd10f8eb48c8 *R/partitionmoves.R
1fa7ea93687e2a6e00f7a277e99ae853 *R/partitionposetfns.R
fc32a58ebac759449a73502b5cd03fa7 *R/partitionscore.R
ad9d33e28e486732c454f21bb772e586 *R/performanceassess.R
e37329d31ab62c044693c324dbc751a7 *R/plotS3.R
64ba9e6a13e81d1cecdc45ac9312322d *R/plotfns.R
a387db56c5e21239ae74563e7e9a3db0 *R/plotusingrgraphviz.R
2906d20767187f9e86bc3ad6b9ef9619 *R/printmethods.R
3a08bb28981619fc9b3fac24a2a4ff67 *R/samplefns.R
2666c1a520b26e5f945d922ffe71ab0f *R/scoreagainstDBN.R
443cf8ea56673198cfd0f0d95839e878 *R/scoreagainstdag.R
6d5fe44a0d37a4952972767cd038ab0c *R/scorefns.R
3c1b8ee1f7b0f7fd63764f1b4f2474cd *R/spacefns.R
b581eef2d0183b62bf5799bb4e71beb3 *R/summary.R
686a5c002f629a5f9a55557f56edde51 *R/usrscorefns.R
da4961c181c223dfe7a8a18b1c881604 *data/Asia.rda
2d832c7ec6b5dca176b2ee0880cb78fc *data/Asiamat.rda
e065fc49f37d8f714f99f9df079cb39e *data/Boston.rda
7c8eadbad0fd9d73a7e02d261a7cb820 *data/DBNdata.rda
8f916c344695e71e45a02355eed7d8fd *data/DBNmat.rda
c19e382c35248706f175919c57fc1fc3 *data/DBNunrolled.rda
fa8a856d7d07bfd10cae5ae239297dee *data/gsim.rda
301e7f970eeda32db6a4e742a139b0c5 *data/gsim100.rda
31ed0ce5438b110996d3c7282c493922 *data/gsimmat.rda
93d898fd90fa8a3426fb6cafd3750f40 *data/interactions.rda
c2fb70daa15bb8f5d67392e41dc8e73a *data/kirc.rda
c63fb038d0eeb38fa010e4cf3553beff *data/kirp.rda
eee735f2ca5ff863bc2e911bdc35d0c1 *data/mapping.rda
fd76cb557e6f6685cb142215545c892f *man/Asia.Rd
b24c23657349dc1f7d3f91387d053d50 *man/Asiamat.Rd
18d195d501546dbb67e4b02798138a02 *man/Boston.Rd
ff60ab71d7fec40fa212b951f0d9fca9 *man/DAGscore.Rd
7227e0a4a231b2b52f60764c90e6f1da *man/DBNdata.Rd
9dd12357b282c0395cdc703fcb69f10d *man/DBNmat.Rd
0a626ecd45e04b82fb20219dda248495 *man/DBNscore.Rd
1f5a2fc5f2c2b8de3afdab5bb241f31c *man/DBNunrolled.Rd
2cfe927612815a85f159a71e2fe7de78 *man/compact2full.Rd
cf43ffddfd82251e493f5acdec5a2a1b *man/compareDAGs.Rd
055454f2c4b6edbd1d946b74b566537a *man/compareDBNs.Rd
f2930acce778c24ddaa917e46e404047 *man/connectedSubGraph.Rd
350063341a8b25ee8bbbbc7eb72774c0 *man/edgep.Rd
b287d9df2079e01c7c5dd53e61126d93 *man/full2compact.Rd
60221b1fe11a9b1bace3932efcbe3a85 *man/getDAG.Rd
8bddcb37713e20efe3b448af5cc13eab *man/getMCMCscore.Rd
0670153401fcf4fccff1d0af7ad7f278 *man/getSpace.Rd
32352fff62a489c39439df287e22e7b4 *man/getSubGraph.Rd
3f7c5697cc86593011e17cafebd209cb *man/getTrace.Rd
470aef841941ec0d8a6e03aeb279899a *man/graph2m.Rd
b16b6615474c127d36ae187cc120216a *man/gsim.Rd
1b7e3e8e6c08f30ced116051dc28372a *man/gsim100.Rd
6d2ad343d17f137e914d7b5838771716 *man/gsimmat.Rd
b2d5daa741df9b9051bf9e6eb7447763 *man/interactions.Rd
1d69610eb0fc4cfbc67e5333faee0e0a *man/iterativeMCMC.Rd
79ec04e2b9083c2e3165b6798474896a *man/iterativeMCMCclass.Rd
84aaa873ff5e551187f019a15245602f *man/itercomp.Rd
26472a8e80a51f1b47abd45d9ffdbb52 *man/kirc.Rd
6147e8f9ee04a43d448f58d02e983c9f *man/kirp.Rd
3f909d0626165e9a6673fa65ff5442a3 *man/m2graph.Rd
951c35e96b6f6434a3ed77ef68ab4b35 *man/mapping.Rd
2e3d6ca02ae4b82a92e19cd25097b570 *man/modelp.Rd
b401b390a6fff11506e739c123ef45d1 *man/orderMCMC.Rd
273d13fb80f0b98888b8e169e9796ed2 *man/orderMCMCclass.Rd
b76b75fc9014244a95aa1dbea442ec55 *man/partitionMCMC.Rd
01f622c16c33fc9a6ca4007e11e25466 *man/partitionMCMCclass.Rd
5132ccc650b37e8cfd3a25b81e2c54a8 *man/plot2in1.Rd
13bbed0e24ad417069335992213df6bc *man/plotDBN.Rd
a610a89809989253021ecdc66c8ad2bb *man/plotdiffs.Rd
6a6f29f3a4a175e47ba0e8ec073eb898 *man/plotdiffsDBN.Rd
ac9ee1b3621a2106584cc257d3634954 *man/plotpcor.Rd
9871fbc0c00186ddfb870da243a7ba7c *man/plotpedges.Rd
b4e035300ab5db6fb60065c37def8902 *man/samplecomp.Rd
4d8ac345136c792adf097c16d5c5f374 *man/scoreagainstDAG.Rd
e0beed35e904e9e60f28b78079e53f2e *man/scoreagainstDBN.Rd
39d6e69f1bd96550378a8fbd1beabd2d *man/scoreagainstDBN3.Rd
3a93a71bae45503f2bab7d370b3bfe89 *man/scoreparameters.Rd
9a6d653a7d8a50b36c8d8d1faf867195 *man/scorespace.Rd
ca05fdb79f44ef268aa8f51b5e85e85e *man/scorespaceclass.Rd
dabea337742cc67e48d0863d59c455ff *man/string2mat.Rd
aa615cdff2ad3e66b6fd7bc5c9cd58a0 *src/RcppExports.cpp
8a65bfe6d4396888ebc6545845e50f9d *src/cppfns.cpp
