b1b543c45ec7cc6ccf141304f427e792 *DESCRIPTION
fe443ef269c6eff01c5e394187beb57c *NAMESPACE
adf4b28806313d104b763e510e258158 *R/as.dframe.R
d7cbc6c188207b992e1b71f546ebe2ac *R/coef.haplin.R
9deddf838ec2f7adbe8ef3fd9d959524 *R/coef.haptable.R
a09a23960a4fc15e0e95ba59b190d9c4 *R/coef.tri.glm.R
212cb8a330951692bb9cca21a35aa5e0 *R/dframe.R
e176c99613d2e9a34699c6cd72443755 *R/f.EM.missing.q
581fb8a8acfbe627c0f104c1eb165908 *R/f.HWE.design.q
4e98faefba1ecb93880c464c87bef997 *R/f.HWE.q
6170ba4c845e98920db93fd3ad7ca973 *R/f.QQconf.R
722e800db38e2c060d6ebb0104bea091 *R/f.Rplot.R
a23d12db0c35b81a5d42d736f92444f0 *R/f.aggregate.q
c099b79bc3a709026e521a24fbf8f6d4 *R/f.args.from.info.R
e4d65cd666c365825bed5c21742f26c9 *R/f.batch.R
54c36c5767469e51bb9b81c93d6d4c95 *R/f.bdiag.R
205f0f51c40700a177f4dae2646a0f4a *R/f.catch.R
548197361a4d507820d061ff081237a7 *R/f.cc.glm.q
2dadcc27f1111b4ab4d374e0182b7fb0 *R/f.check.pars.R
4990afdcf0af69a6bd390dbc1cb7f054 *R/f.compute.effects.q
76362a661b6810b9b64daf390e011785 *R/f.create.tag.q
7f2b2ee8482a00f266a4c245d57bef16 *R/f.data.R
67ade77d7603b1c17e49aa81b88983fa *R/f.data.ready.R
6a1f96a968e85591636075c63221ccdd *R/f.fill.effects.R
ffa1571594cdf69e16f7476439cf10ea *R/f.final.loglike.q
cd6042962cf6c1336a317af737291ed1 *R/f.get.data.R
2eb0c3c538b5e30c8a405876ca9093e6 *R/f.groupsum.q
a1fba3c17edd93645c93566d2ae3855f *R/f.haptable.list.R
a38b0d268abdc0d91f07bd2f587b00bc *R/f.jackknife.q
e51e533b5e7a1440b35397c61786cada *R/f.like.ratio.R
b0721db4ee5d941a2a0b5ce8330d663c *R/f.load.R
471eed341c498e8710f3173608441f8d *R/f.make.design.R
aa2792ea1a47ab1a9ce135ddbd9ffd9c *R/f.make.index.R
1dcc2f1c473f6eeac6486629ea084582 *R/f.matrix.to.list.q
f0c98d01c8c1dcb17108a2bdab663860 *R/f.ped.to.mfc.R
1d4b9e471aff08375da681857817bf84 *R/f.plot.effects.R
e8d263e083b68989410c2a7b305a67b8 *R/f.pos.in.grid.q
b6cb6d709ad563a8b0012469711ad971 *R/f.pos.match.R
e61adce10c75a27d19436164261e5b40 *R/f.pos.to.haplocomb.q
89175c4947ab7d14f849a97e4a674235 *R/f.post.chisq.R
da9dda87d3319580099934ef757c6b8f *R/f.post.contrasts.R
34818db459abea49f2ca3d954b66cec0 *R/f.post.diff.R
f65efe622a53956f360ca112e829d460 *R/f.posttest.R
edd9d6a6032d343c5aeb4269181fea3a *R/f.posttest.score.R
1064b275c9eed33e0575379480ce528d *R/f.preliminary.freq.q
9f1643725017db2a66b427a7ff9d4dd0 *R/f.prep.data.q
22d2a920219d2b18916edfa41ee17495 *R/f.prep.dataout.R
5e8716433142bf6071e6f8b17eb6fb38 *R/f.prep.reference.R
4bf6bad0999fbfadf3239f0206f3a5b4 *R/f.printlist.R
f33c60bb2d067ac8ec019a7104af81e5 *R/f.read.data.R
366df6b6525898e8c9e770e8cc8b2137 *R/f.redistribute.q
da9d40ffd50332941abb75e52ee39455 *R/f.repl.thin.q
32bf152b498fe0ef4dcd346d88023820 *R/f.save.R
b9337bf8b776514ff63b024954544538 *R/f.scoretest.R
a788a945aaf12c7f91b503f23be2d8d4 *R/f.sel.haplos.R
9872c732b18cbf5a669d21f9074c4899 *R/f.sel.markers.R
6754f1e16add24e6db797749190dd3b8 *R/f.sep.data.R
10375265ebf8c7c99c66fd4521c3e3b7 *R/f.sort.alleles.cc.q
5990659530205c391958c2f5ac92fb7f *R/f.sort.alleles.q
dbb836b8d275511d42e8b72a38b8d50f *R/f.split.matrix.R
ed291193b4938fa8ee91f021f0591862 *R/f.split.vector.R
89f164e1e56d5d46f22de43b60fb34c9 *R/f.suest.R
af795484ade8021673639b0bbaf4474e *R/f.tri.glm.q
6aaafc0b3b29517baa73e9bcb646164d *R/f.triad.to.transmit.r
a3e69ab1270b955e94a6c374512d8450 *R/f.var.covar.q
4fe19914e590af4ea691596c3b9f76c1 *R/f.vis.q
2a17c0693dfd5a6ae537110b107ad870 *R/f.windows.R
cdc85433da026125477c9f0f1b68b365 *R/gwaaToHaplin.R
fbd4c7bb3d8c6655a70d33567d8969f8 *R/haplin.R
4cd2716b05c4bd81cab1fca2fed1a8bc *R/haplinSlide.R
35e1c0e0b4f65ab4e11e1698d42c6f3c *R/haplinStrat.R
b17e1640cebe1ff3fc2189908e6e58ae *R/haptable.R
263cb763d8d292b7e8eb3a414b8c9679 *R/haptable.haplin.R
a7710f937c7899f81cd378d1b5c1a8e7 *R/haptable.haplinSlide.R
2269c7fe0b8e996034bab13d82bf2b18 *R/haptable.haplinStrat.R
6545419be9a77cddd9d879320f9b62c8 *R/loadData.R
f1f50e85cab58cb0fdc0f619da44b77b *R/output.R
4b052199e55c75e4876fcb24cdd6abb8 *R/pQQ.R
d671ee4362fbe91ecbe2d0e33b102554 *R/pedToHaplin.R
b9ba815f00dcd03e27ec875846527c88 *R/plot.haplin.q
ff15360393362f79aaff93010b5cb27a *R/plot.haptable.R
fce185d43cfece3292715a82d1e74d04 *R/posttest.R
507d5683060c35d8d1abfdc78855b4b3 *R/prepPed.R
88beda7affb0862a836e15a2bbd0d99e *R/print.HWE.test.q
06b874c7fafcddfdeacd4a3adfcbbb04 *R/print.haplin.q
e1654eb0f463ec23fafc311e148d1f35 *R/print.haplinSlide.R
adee57e3c09fdc2c453ce81d63665dac *R/print.haplinStrat.R
4e4659f7c19c9957fc97964166782881 *R/print.info.R
863e6bf58878b341f6a990dad2c24e26 *R/print.suest.R
fdb41c4f851e9107033218ccef1b4d12 *R/print.summary.haplin.q
7793b2568bff91f259c3a9f19528ceec *R/print.summary.tri.glm.q
45a5d5213925cc951cf82f21293e7e0f *R/print.tri.glm.q
4a8cb1e2d2a32b0cbf5487f97814d001 *R/readData.R
20e4e62cd1c8ee96387d1480c20e1cb0 *R/saveData.R
b06f8049c6736b51545fede920ba6f74 *R/suest.R
2b26b468a76469ad7f8a267171c4494e *R/summary.haplin.q
c88df50ed240272ed5d1b793124f0449 *R/summary.haplinStrat.R
1e4ff2eb313185667f205a55a9628e5c *R/summary.tri.glm.q
6157bd592e940da6e29fa70f1c2899a9 *R/tdt.R
8ff1da8e5e9cba7df5f736923dc0c14b *R/toDataFrame.R
3bd54a8cee5ccc63f504375d63f5c6f0 *inst/doc/Haplin_data_format.pdf
04c0f9ad0802253c3055c9e508580465 *inst/doc/index.html
c8eadea48c7aa0355c855306bed4c811 *man/gwaaToHaplin.Rd
54d379ee8e624b0c4918b965a3025bb8 *man/haplin.Rd
367c4198a074bfa48fcf83cabe67ce84 *man/haplinSlide.Rd
8624e1d1aa73f095dadc92ff512a58c1 *man/haplinTDT.Rd
0ac96fa6a31f2de54a8d5d5e835987e5 *man/haptable.Rd
39b3a53e65dc02dee1d945c5f75d2bbc *man/output.Rd
103c7d44fd3df78982ddd659a12524dc *man/pQQ.Rd
ba9784192611e97d88a189e1d3a86955 *man/pedToHaplin.Rd
081b406ea736196b01d200bf80d1a009 *man/plot.haplin.Rd
b39fe816c173c39564a8ddad4e7324ea *man/plot.haplinTDT.Rd
fb0a08f13617d55cec1671e0b50ecc6f *man/plot.haptable.Rd
e1b714c1941109f7058d5cd2420f0f16 *man/prepPed.Rd
a07a7b0f9c06de19d61710b8434c906b *man/print.haplin.Rd
b101cb292afe0cdc1c67341c1eccdb8b *man/print.summary.haplin.Rd
855967b2b3e07188fce0bd02e957904c *man/suest.Rd
facb541c40b514717c73a3796535defd *man/summary.haplin.Rd
26bc6146ddb8a14fcc453768d380bca6 *man/summary.haplinTDT.Rd
771ec463e7f07d73d2da772d49190ac5 *man/toDataFrame.Rd
