bb53af4ea297dcadee78b9507c2d89db *DESCRIPTION
c22ed6d62feb3695a15b9f62ce053564 *NAMESPACE
c4281ecc99bdf504c344f9b74f9c4280 *R/RcppExports.R
fc32dd9352f3bd40d7287c12082c29c8 *R/completeness.R
27b4a1ac22229ffaefa553a72a65c1a6 *R/conttac.R
e936a3e1a826d53f0ce468635b0e3736 *R/freqlist.R
dc6fbc89b5616e38988a4004c60cfabd *R/genecont.R
78ab0861cce358ad5de5c11af711004c *R/getNe.R
3a44a59f6c311f6297ff0ebb2fcd702e *R/getcskip.R
606a863f464bb3129ec39b7c95518f97 *R/getskip.R
3c2104247b393c77062d5ff6b633bd37 *R/haplofreq.R
adcf6116f1b140c7f7b840ea5fee2df1 *R/help.opticont.R
5b0dda3f315a0f920930dd32f6caef0d *R/help.opticont4mb.R
e48c7582d741eec28047ecc90b0db906 *R/kinlist.R
6ebf6ef9a434e43ca57ee8b981739f05 *R/kinwac.R
09f0684aef18d837d139e06079efba08 *R/noffspring.R
d3eb8ffe7bba4f32b9f159e5e478a880 *R/opticomp.R
0861da6471202b97efc67ac5d51f0d02 *R/opticont.R
96bec8607e6793165c623c9441ca04e0 *R/opticont4mb.R
9cbd07a914c9319d1c9f5208a68775cb *R/opticontx.R
3fdc1f9793970c099745f13d2a6067f3 *R/pedBreedComp.R
fd68678be972f9f6a7949c35cd07de3f *R/pedIBD.R
d984a4210fdd53d14d6bf3e748194bd9 *R/pedIBDatN.R
d98ced67c22ff889b4284f263909ccce *R/pedIBDorM.R
9abe4b78368eca0dcca449896e69f4df *R/pedInbreeding.R
790fc283de6b76f0ef7285bc020fb641 *R/pedplot.R
c70707a36e808fa5a12877ce2565a0e9 *R/plot.HaploFreq.R
7d5c92fd46c2c8da0c70f52c395c4416 *R/prePed.R
b0215d6cf961d8cab45e42f758c91e1b *R/read.indiv.R
ed85bef891507cda5bd6fb29fce91b7b *R/segBreedComp.R
3d4a00487e90b7f1d0a062abcaf8d891 *R/segIBD.R
a6b3ce04639e5ba9973ba94f086152c2 *R/segIBDandN.R
e80a6e00f96103dfe9b61ccc8b1c441c *R/segIBDatN.R
ba567f7e8d8ea2d9f30f14026dac4216 *R/segInbreeding.R
5e8561ceddd77f4868e31e52c45d53ef *R/segN.R
c4a2a1d4f14ac74d774411bb6062cb69 *R/sim2dis.R
0ff7879d5b347cadf44e7358f3d6b630 *R/subPed.R
1344f6c38a81d9dac048c1751e4c1e61 *R/summary.Pedig.R
7335949e539e7682b589e78e4b3c9385 *R/summary.kinwac.R
e76de1848aaea5a5dbd3c0fd3a0bb712 *R/summary.opticont.R
3cfa80d8b75c4b7dc1c6c101dddc5b78 *build/partial.rdb
09f68bef07bff42baa3ff23836b9692c *data/Cattle.rda
83d68af9df083103339c5f3a7b5bc321 *data/ExamplePed.rda
8ee05469368e87be238ba5466719205d *data/Kin.rda
57e6222f4420cd4573ddca40d10f1009 *data/PedigWithErrors.rda
6a0e6277c40c268b28062a3771be4592 *data/Phen.rda
03d6465a5b0abaa125b78360a31aca53 *data/map.rda
b7221de452d38535df8ab915fac4612e *inst/extdata/Chr1.phased
5618fb754a7455e7cfe98b9cecbc1427 *inst/extdata/Chr2.phased
4785c96def9a6ca09022bc5d02499dc9 *man/Cattle.Rd
c16062ca4c6d3206c4c3567aca546baa *man/Chr1.phased.Rd
ac7d45f2605d40401d4d60bb39e4c27e *man/Chr2.phased.Rd
23f7c0196fa43992cd08fc3f3f394261 *man/ExamplePed.Rd
0e81cda49c52d1e8cfe7de672fd752aa *man/Kin.Rd
ab2e4ca4161e5749ac8add05bd31508a *man/PedigWithErrors.Rd
0282224ee209e04c0f690720ab7ac218 *man/Phen.Rd
8c1a7023bf911395f59dd5f807e52a7f *man/completeness.Rd
bb9b51b31aeccdc15731c9a1c2d91b70 *man/conttac.Rd
810f7966fee139d5332c9e7a46d7af8a *man/freqlist.Rd
ada2a09d51ec070ffb59a21d4fc84acf *man/genecont.Rd
28667b55372c11aebd554e8df42814b0 *man/haplofreq.Rd
dd1f5a87789bdb67fda6470f5d229a77 *man/help.opticont.Rd
14842b0711f64080b473f86131adf849 *man/help.opticont4mb.Rd
135a6197ef812675275738eada5b126e *man/kinlist.Rd
fd7e4692b225467ff9dde5076f34c660 *man/kinwac.Rd
8393928231c613a901717b1cb88080d4 *man/map.Rd
2185b92b77ae5afd317071319b72b5db *man/noffspring.Rd
b42cc5f00f5740f0caec4ffa0de919d8 *man/optiSel-package.Rd
709f030d6623d98b1e77eb8615efce5e *man/opticomp.Rd
316a595b884e7109bac2d7bce64a2fc0 *man/opticont.Rd
2495c05157c3a053acbb7b3102d61273 *man/opticont4mb.Rd
355a84e85d02052cc187bfb70e2bbc38 *man/pedBreedComp.Rd
f039e6672747ff851b5afb1c0ef91ab6 *man/pedIBD.Rd
d888ec0b8112b577fbd49ed357e69af6 *man/pedIBDatN.Rd
f8f21b62a2e391cc06a30fb58bfc0d59 *man/pedIBDorM.Rd
a8a2f737df9e5f3d7368a0f1d14d04cb *man/pedInbreeding.Rd
ffcaa394388ebe87fe4542fa4d60da52 *man/pedplot.Rd
2b1d73ab543b3d29ab47af6c263ed9ef *man/plot.HaploFreq.Rd
c8a6074fd8c97beff7c71617345ad365 *man/prePed.Rd
db4492c7b5192bb1e6e2606391774d64 *man/read.indiv.Rd
e31124c158c30eaa30af418830f4f9e0 *man/segBreedComp.Rd
797891264b93ed253fde574a80da41fe *man/segIBD.Rd
0b51052dd9df264048bacb2d2eb3e556 *man/segIBDandN.Rd
58ff53894f0def321b8e9504d3127c83 *man/segIBDatN.Rd
5ff2be815c9a1844c1d9e0cccb6f7a37 *man/segInbreeding.Rd
e38c15dceed69726b55b1a58ff5bc6ed *man/segN.Rd
a22d02a7c772af4c59cf9081a8d37386 *man/sim2dis.Rd
78a929196b25857841ee839ae3cd49bc *man/subPed.Rd
421cc18cd35d357d8e3688474c767fe0 *man/summary.Pedig.Rd
8fe923b7410055e3b24d487ef14ed58d *man/summary.kinwac.Rd
7858e0e5cb07f7e5dbcc90adc89f703c *man/summary.opticont.Rd
2a6f9e9e044a78154d3cfda5936d6f48 *src/Makevars
8d46d69896a1f1d31ed76035a0e49d67 *src/Makevars.win
09520affe28f458834bd8a9b0316be54 *src/RcppExports.cpp
ac580c6b6f3799c70efd8d7869b06828 *src/init.c
b23b87994337894c9ee99a8a7871893f *src/rcpp_completeness.cpp
c98892c45532b4e53f1bcc4d231cfa90 *src/rcpp_haplofreq.cpp
fc35055952882daa9c35875dcd953cfc *src/rcpp_nativecont.cpp
61184c6e8e8ac936bb2eb8d4ec858224 *src/rcpp_segBreedComp.cpp
376ce791316d5b3a4f5253794a976661 *src/rcpp_segIBD.cpp
8b791faea8e22ca7cec450cae35c9175 *src/rcpp_segIBDandN.cpp
cd8d8ad75aaf97c43535ab8b754c45ef *src/rcpp_segIBDandNVersion2.cpp
9c3364cee21f42a8bfb15f0b1dee5d17 *src/rcpp_segInbreeding.cpp
ed31fa6bda3c5c233c7d2b1ae034d05d *src/rcpp_segN.cpp
