04906c303f7c51ea7ff085815a128a60 *DESCRIPTION
c4f0ed213040a61193d9b91e8cb310b3 *NAMESPACE
a76b9010512c5dc981d1c51b5408e6cb *NEWS
e3e9772a6ad9aa29b47ea638597dd231 *R/Index_calculations.r
0ed03611c87210c6d1804f3df27dc768 *R/amova.r
0c91096adeb90bf05a5a2327b4ae85f9 *R/bruvo.r
00598b4c173cf6b0f86ce9e852560d0a *R/classes.r
99ea539d9a3c3f7fc77dcca12e65603c *R/data_subset.r
b0040ac3f553b56540f8ae30a004731e *R/distances.r
dea3c7f3fc9da97846dd2d6a21d5240e *R/file_handling.r
707a29564da4e88317085b8f740bb5c6 *R/internal.r
261277045ec14cca7fc7837b28558b77 *R/messages.r
117f3b3ed17e3942ba68f29cb871631a *R/methods.r
0cfcf41043deeccf05f0ab01823763d0 *R/mlg.r
727052052e3017aa80138d9ab89244d1 *R/poppr.R
cf63b50918165380e53df6724959a95c *R/print_methods.r
b19859acf87966227c84baa5e91612e4 *R/sample_schemes.r
b4868be4ea125d5afb77005ee7d968ed *R/sandbox.r
9c962d1c5496440a5696873acc8ef998 *R/visualizations.r
bbe9f4a0193f12b63cb376d5d77ccf6a *R/zzz.r
6768650a8851d7c7d2e685c26162f7c3 *README.md
fcf855bc0586ab2f1847743a6ee03284 *build/vignette.rds
fbfebaede99ce01417ea1aa9fb7163a1 *data/Aeut.rda
7179772996140ec419b8994e661d56c2 *data/Pinf.rda
f1661a64c22913dbae9155bbb898abe6 *data/monpop.rda
8a61e5550a8dee80c5f83c394c85abe6 *data/partial_clone.rda
597535c162074c30d9e6207edab3ae73 *inst/CITATION
b6f5caa6444d16883617cf477dd67b1a *inst/README
f35c296ceb458bc67fad2c7557c8cd4f *inst/doc/algo.R
2dc6be7b26c48b4903556ed3acaa100e *inst/doc/algo.Rnw
6a1b04dbc4bea04097972ae13692cb9a *inst/doc/algo.pdf
791b0621aab344b7be905235605e27cb *inst/doc/poppr_manual.R
d360547a17f1932bf9bb872dcc09d445 *inst/doc/poppr_manual.Rnw
220e2e60f68581b0226c35038b59eaaa *inst/doc/poppr_manual.pdf
2e1ba95b8537037a21ed3cb8d507f28d *inst/files/rootrot.csv
502952e55e2a1dff9eb742ac05282e12 *inst/files/rootrot2.csv
ba2b4146131f64837c485ce100bbdbf1 *inst/files/simulated.dat
04ef16dce108c464e1d0ca2808a8865a *man/Aeut.Rd
1046f2fe57132cea0b4aef0fc7f1c039 *man/Pinf.Rd
1cd7d98f315db717d61d149d82e730a4 *man/aboot.Rd
58487dc31dedacc05d5bf088ede506ed *man/bootgen-class.Rd
2cfdf151b80191c81fc395b493aed7b6 *man/bootgen-methods.Rd
0053a099e2de271ecee548eb56675bc6 *man/bruvo.boot.Rd
bef84c3eaa75b0aec4039a233b2b0a43 *man/bruvo.dist.Rd
6b74645c46adcb40e486f3f257d4c7b8 *man/bruvo.msn.Rd
0389f1ddd2650dac40455640ffbb2718 *man/bruvomat-class.Rd
80718e9b160d42e45dfd24dd19eb8f2d *man/bruvomat-methods.Rd
48669898a366dc8a7a282eb01e01606a *man/clonecorrect.Rd
1c1a24fc93cb741cf44dfb7bcd1cd955 *man/coercion-methods.Rd
85f0832259daaef566449a6735b8eeef *man/diss.dist.Rd
0491dbe6b8ef1d5649c8632b8c5b9438 *man/genclone-class.Rd
bc62a8ee89274f2f6d570bbeedf744c7 *man/genclone-method.Rd
b87db7d9e02b15a828a98e364b2d87c1 *man/genetic_distance.Rd
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771ab41f4db14690830e2daa20b6ce91 *man/genotype_curve.Rd
327d1ad62e7774aed97ad52f52103b02 *man/getfile.Rd
1beaef27429a85bcd9c31aae5e4ed4ed *man/greycurve.Rd
146646f61eb8f3b1015dd0424200970c *man/hierarchy-methods.Rd
9952755dfee324b02c3838a1bfd9d718 *man/ia.Rd
6be9e1effaf8411c48eac85dc8478383 *man/info_table.Rd
6d25e8ad251748daef6206195716e73d *man/informloci.Rd
1238eb4ef197b39d2ee9b92341be3a50 *man/is.genclone.Rd
c988976f0c0918e508f409edd381eda4 *man/locus_table.Rd
4e2ae5bc6fd390f0b65b6cfdf8c66888 *man/missingno.Rd
b1fa780a842ea956661dbcad6f8c056c *man/mlg.Rd
88aac1994ee53a1f8414533a1b79f62f *man/monpop.Rd
4bc52499305e6033db915339c817b2e7 *man/partial_clone.Rd
7d8d05ac8dc469331e49609861051759 *man/plot_poppr_msn.Rd
01d42e9020f7ecf9d51045d09c401d49 *man/poppr-package.Rd
36deb97f8a6a12518e129ecd56ca7fd6 *man/poppr.Rd
665d843b7460591a811d1e86a0004c8b *man/poppr.all.Rd
667216b33567e532e5fad33d99d57916 *man/poppr.amova.Rd
ccdf007d5bf3055890578d0a281323a0 *man/poppr.msn.Rd
dce5aee6ff55a4a25e6b3468bb3e64cc *man/popsub.Rd
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bc81d355499bdc47fd67a15a46778c33 *man/read.genalex.Rd
73a898824b476121e8c32ec209f01594 *man/recode_polyploids.Rd
7492cb715c5351b9e6fbfb39db9f4246 *man/shufflepop.Rd
66715d8d1fff0760f53ad3d100e64388 *man/splitcombine.Rd
912b856c242dfe41c58acbb9b33ea9b7 *src/permut_shuffler.c
54e91f5af745bb343f2a1a2813aa0cdf *src/poppr_distance.c
0a561f03a96806fcea2a55fb110f55a0 *tests/test-all.R
81d293e05b20090285e8fea77c3298b3 *tests/testthat/test-amova.R
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2bf50759890d560395a14c1803a64b3c *tests/testthat/test-greyscale.R
48636221d0439e8b7acef96ec2904b6f *tests/testthat/test-missing.R
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59b35618c29b6ffc6c627e7933800442 *tests/testthat/test-polyploids.R
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fb211ec4a1e63816a1a91a984ce877f0 *tests/testthat/test-values.R
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1e8cf50632aa8886055e23aee71785a4 *vignettes/figure/Aeut_MLG_Ahena.pdf
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8271b4397cbff856ead9197eeac9cbaf *vignettes/figure/bd_histogram.pdf
423c40e418e32b872c6d1e7a553ec6a3 *vignettes/figure/bruvo_msn.pdf
81f5528dad3578a1548bc43914cecc23 *vignettes/figure/bruvo_tree.pdf
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2bd1a4fd9d577f677a735064a29aa149 *vignettes/figure/greycurve_small_heavy.pdf
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