f9ee733ec847ffd5493f4f41d5fb1e33 *DESCRIPTION
87aca8b4e0f026ee8203d231f6f05136 *LICENSE
532c9c1cb49377c323bca56ba315d978 *NAMESPACE
ab6654fdc604ed006930f6b495b18ed5 *NEWS.md
8add172a092a1b902c4595200a049604 *R/RcppExports.R
9c2ab8d5bcde5320e5feb07c7e5fec4c *R/boot_pvl.R
5089d62eb852fd7aff9cc25f7afb5987 *R/calc_Bhat.R
3950708057de38be22fb2395584a1872 *R/calc_Sigma.R
63305cfd85cc81db751e9481995cbca5 *R/calc_covs.R
97a0928c5865b4bf6d4137e847867f72 *R/calc_lrt_tib.R
f7c68da6a48dd87e1d65b208c544b1e8 *R/calc_profile_lods.R
628b3b9e10a9d99df001b403dbd4d8be *R/calc_sqrt_mat.R
17cc885779cdacb062802cf1c9823109 *R/catch-routine-registration.R
360923d38016bbec4d6ade12410662b4 *R/find_pleio_peak_tib.R
33141362cfce65ed2dd330953ae989bd *R/fit1_pvl.R
6044b02bc3b7929a8ce210646c2031a2 *R/get_effects.R
b8eb7edaa51c2ee6323d6b4177a381b9 *R/plot_pvl.R
e54251ff834e8294f3f9e511bd57e218 *R/prep_mytab.R
5d66714b50d440985f1b5dbf3a19b232 *R/qtl2pleio-package.r
0fe64f6e6b5bba182e3f0e048217d05e *R/rcpp_calc_Bhat.R
12759dd937aff722df49accf80ce6a12 *R/rcpp_log_dmvnorm2.R
8aca00fe34d3d851e71ecda3f1875572 *R/scan_pvl.R
8d05702945beaf78d5ed9ccfacd27e15 *R/sim1.R
f0c20c7600bd59c15d77991462f8e2df *R/utils-pipe.R
5f9895f2a6d2d3cfe9c2ed44f16b4280 *R/utils.R
8fe0454fb0467e2b77612d98ff1facd2 *README.md
f4ed551a71806b9c1418aaae94e16ce8 *inst/CITATION
450595a6468546261e68f21cf3a11edf *man/add_pmap.Rd
3f45e48b0182af5741c15012df2aa071 *man/boot_pvl.Rd
c312774627d8a57a07866fed96ef52d0 *man/calc_Bhat.Rd
9b7281fcc13ea0fb765e71a7f35b6636 *man/calc_Sigma.Rd
f2fe20bfa9723e460e4b473e4d2b8490 *man/calc_covs.Rd
912fd2329d5dbfc74b3170e8885dd814 *man/calc_invsqrt_mat.Rd
e8764a056039574baf472a08ba4be1fb *man/calc_lrt_tib.Rd
3c46bbb6c10694db42b2d5246dbd8707 *man/calc_profile_lods.Rd
c8ffd0638f697475b0cb66984fc17bd6 *man/calc_sqrt_mat.Rd
8978e4d11b88d9fbd0a066968490b703 *man/check_identical.Rd
d6c7249ac5c85dbbdd0350d2f96e2e26 *man/check_missingness.Rd
65bd15c4bdd4b3a2d52342bf2928b041 *man/figures/README-1d-lod-plots-1.png
811205589fbf3a127e7943357a1f2b91 *man/figures/README-profile-plot-1.png
e62ff07f7ef0b25f2fd523e106c2f44d *man/find_pleio_peak_tib.Rd
73d9ed46db93ca712f2b64aac9cd05a4 *man/fit1_pvl.Rd
6fdc9c0b127834cf023714650815a293 *man/get_effects.Rd
e44d217ec6f80d51b54d7e58e44d0ae4 *man/make_id2keep.Rd
8b061bc1b3d08e267b54853d19b6d447 *man/pipe.Rd
7ee26b9ff970bbd0b81d1b95d9ce6231 *man/plot_pvl.Rd
ffb5721af3d266fa9b033e75a3581742 *man/prep_X_list.Rd
21f3ce4a4cce232069ceb74f0361abea *man/prep_mytab.Rd
9dcb4e3f8b82fc98523525ee6dccda88 *man/qtl2pleio.Rd
a688eaf94b32deba73b17d5978b44901 *man/rcpp_calc_Bhat.Rd
e574ac8b66b91332f333de9a668c30fb *man/rcpp_calc_Bhat2.Rd
9dc53ef706eb15998ccbc9744c18532a *man/rcpp_log_dmvnorm2.Rd
ffc24b64e8e866a097f24b90d5edf443 *man/scan_pvl.Rd
149917409e171e969caa9be0db8231df *man/sim1.Rd
1341cc64048f90ceec49737137dde0f5 *man/subset_input.Rd
9282820f5a5786510d152118987c2124 *man/subset_kinship.Rd
4c1568def1d97bc2337bc51d8f3a0693 *src/RcppExports.cpp
bac91a370aad045e34e3b56789ccc8c8 *src/eigen_sqrt.cpp
b64b87dbb5b6560bc7f6df822acc8ec3 *src/matrix.cpp
88ad5e69679c55a6c5c81b084e868894 *src/matrix.h
660e434288e5a79080f21d6e3d8ef592 *src/rcpp_ols.cpp
98e1ddf0d51dffad4167ac1463c97308 *src/rcppeigen.cpp
3332a4affe5b211b37b65a3d3311d9ba *src/test-example.cpp
c2cb0c30e10da611f9fbe56aea52f7a9 *src/test-runner.cpp
c1c274e5c1eb5c07330ba6aba388d861 *tests/testthat.R
0918929cff266f6366b2cdaa7ac8be1d *tests/testthat/test-boot_pvl.R
cce4da22dcc6add216d230519dada8b3 *tests/testthat/test-calc_Bhat.R
17a07ea1e0446b5edc549849023dc32d *tests/testthat/test-calc_covs.R
6f5e7a1e58c265c025fe831da3a96e46 *tests/testthat/test-calc_lrt_tib.R
d4dec278c695f5da18e78256e4e97a16 *tests/testthat/test-cpp.R
b266e4ac00d9612a362c71f31983875d *tests/testthat/test-drop_depcols.R
5881aabc1e5714f2d322311fb3935932 *tests/testthat/test-find_pleio_peak_tib.R
736afa587095cca4e43716bf8631ed7f *tests/testthat/test-make_id2keep.R
a83e2032e7438ed1d190709f4352a0e9 *tests/testthat/test-prep_mytab.R
17027cae95291f6dd4d82f66c3b4a92c *tests/testthat/test-rcpp_calc_Bhat.R
58cbcad3ee935d81b6e4482ecc40ddab *tests/testthat/test-rcpp_calc_Bhat2.R
459be3be1e266f0c754053d080b4d27b *tests/testthat/test-rcpp_log_dmvnorm2.R
e588ca1ace97c9b2f6888c98b6d96c92 *tests/testthat/test-scan_pvl.R
975381ca8fdc87cbcfbf09aeaabd1974 *tests/testthat/test-sim1.R
1ce0a8b7a60b78d0fed079877f0d06f7 *tests/testthat/test-subset_input.R
