01488ffa2f97383a8db12bfe3b9a984b *CHANGES
f4cbbea70179d2eba7d01f7b970b9ba6 *DESCRIPTION
dc30b1db2b103636bc54a9f1f56d7f90 *NAMESPACE
844eac54b1c5cc77bd78c30fc3e5762b *R/centrality.R
cdeb0f3fc1894c3d786124d0679b46e4 *R/cepa.all.R
af126510f9765325ba26979a91217d0e *R/data.R
4b151d41903cf395202bca8e7a8972bf *R/expression.R
a859fdf42ef0a9b3286db00b89e942ce *R/get_result.R
d393aac4112d0956d791dc6155ba40f1 *R/global_variable.R
dd92e2f90ad10bfdde1719b495d23834 *R/ora_extension.R
acde6d30baf6a2110096ec935854fbc4 *R/overview.R
e79fc05d46a92887146feedbe0a53dbd *R/pathway.R
0dabb6b4d3449a86a373587a612cbf7e *R/plot_print.R
88e9e555310d0d1bc272063ed9049dd7 *R/report.R
3a79d2e89d96ade4cfa3e74a1baef13e *R/univariate_extension.R
c02ba003d3469c5da49a900a88ab718c *build/vignette.rds
1e2f676e02a5d147444931c6c4e5d6f4 *data/PID.db.rda
9f105040e034f5408a7646d7d85095a4 *data/datalist
6985141e168a86b8836bcc2017f3be49 *data/gene.list.rda
7ded5bc166427bff3faadd12adbba8c8 *inst/doc/CePa.Rnw
05abb70c1479cc3d1790a66d53ee8fb2 *inst/doc/CePa.pdf
a0e6e789732bce63ae21cd0fe672d5ca *inst/doc/analysis-p53.Rnw
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877bdbcb060576c6bc3fe3e5e55d9876 *inst/doc/parsing-PID-pathway-data.Rnw
be53bb5567d634b6ab783efaf05129e9 *inst/doc/parsing-PID-pathway-data.pdf
131c6dc3374058addd445e018eab3099 *inst/extdata/bk.genome
e94b06d2c8fa8e32a26cf54309eaf5b6 *inst/extdata/cepa.template
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1d50ccb7b43a1e0e303a28875653a6ca *inst/extdata/js/json2.min.js
6262ae821baf35b1d021508cfcc6b2e6 *inst/extdata/js/main.js
1839645dc5af5d4efe8ce1079802e21a *inst/extdata/swf/CytoscapeWeb.swf
be332eb9be4b3dcfdcd757bbc6e495e5 *inst/extdata/swf/playerProductInstall.swf
a0bb6be9d578ab965b39a5752e848d84 *man/CePa-package.Rd
9d39350b07566345f3f3d864d13a3050 *man/PID.db.Rd
609e1fdbb38b5b7326bdebd9dffb5445 *man/cepa.Rd
76eb2b919a4d2853d6716d3658185553 *man/cepa.all.Rd
e44ea8f5f4f77ec354e6481845b6b8ae *man/cepa.all.parallel.Rd
02ab8308e6ba301c004ab66bfab94b40 *man/cepa.ora.Rd
5fbdbe95393293cd464c614d73f60de8 *man/cepa.ora.all.Rd
c3e9a6fb64face8215c94f6db924180c *man/cepa.univariate.Rd
5ac8d4eb2c1c12ce9df3eaf7896c9b4c *man/cepa.univariate.all.Rd
703bafda78d019d72ce5d314df86a698 *man/gene.list.Rd
f7a7075aee371501d808717011082b9a *man/generate.pathway.Rd
54b73e8a2ff36b814f9eb5a08164dcec *man/get.cepa.Rd
a2b2fd149854f69e7f0003da66f23aa5 *man/p.table.Rd
6d9cb7a90c09a306e31973e11308ce9f *man/pathway.nodes.Rd
cab100060521b5b5ec158ea58e0296a0 *man/plot.cepa.Rd
df257fd00f6f97b636305149864bf9ad *man/plot.cepa.all.Rd
c99f17e614a2308ea832ce7a1b131475 *man/plot.pathway.catalogue.Rd
2049970b5e76f16cd4a82549c4adb3fb *man/plotGraph.Rd
ab9c9b2c76cf9c707b9d4c1d22f0d24d *man/plotNull.Rd
b28ffd4870def0d80642e597dca88f63 *man/print.cepa.Rd
c791a3ef84b183b1b2737fde6ebfea70 *man/print.cepa.all.Rd
ac106e863528be7bb5ad6615e0469db9 *man/print.pathway.catalogue.Rd
9564e650f96e52c9dabfd6764a784d4d *man/radiality.Rd
f643c1536f47a88209b416f1f86d8193 *man/reach.Rd
0bab22a3eb24c143c7ad9da62016e648 *man/read.cls.Rd
bf858dd4f8d2471ba7f03dc76c586592 *man/read.gct.Rd
d3bf67c65cabcde3b3d48a1ac2f32ad5 *man/report.Rd
1a24b52c5a1eb27a400244abc73bbf91 *man/sampleLabel.Rd
bb016bd93d552051bece23bde6625b01 *man/set.pathway.catalogue.Rd
4cddcbe443f14a70b6e1bb803903559e *man/spread.Rd
7ded5bc166427bff3faadd12adbba8c8 *vignettes/CePa.Rnw
a0e6e789732bce63ae21cd0fe672d5ca *vignettes/analysis-p53.Rnw
e361719504ee3a7d1e26ee13795fc049 *vignettes/bibliography.bib
0967b9a5ad86adcde8547ebda8e8a774 *vignettes/f1.pdf
6028ad9847d102684cfb61bb55c60709 *vignettes/f10.pdf
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2bf060a7d21a3cc77b07b76412acb318 *vignettes/f9.pdf
17b92106600fbf9a4e272eacd1a0ada1 *vignettes/fdr.pdf
a9ae49b5e4e7394c9cbdeee80f8d6362 *vignettes/interaction-part.PNG
1c7f24f935123ff7edcb5f6471cd552e *vignettes/levels.pdf
dd6b707d47993f358bfa4c17b44c4ab0 *vignettes/molecule-part.PNG
13c69d6c0745fd1e3bb566fd37b4a747 *vignettes/p53-null.pdf
f90f39dd98288d604806fa84260d20e7 *vignettes/p53pathway.pdf
877bdbcb060576c6bc3fe3e5e55d9876 *vignettes/parsing-PID-pathway-data.Rnw
8a0cf788f727ac974c00d6b9aff2feb2 *vignettes/pathway-part.PNG
7a53fcbf6a1fa97e1a13af2c952c6064 *vignettes/ref.bib
