754f2e60eb27bdf37b90510de703a603 *DESCRIPTION
586b2fd1c86a737072c55ec91fc2732e *NAMESPACE
9b483e255c2381ea69902ae91389a516 *NEWS.md
d244eafdd8018540791e8c840dd95356 *R/Motif2TF_functions.R
088cdac735736a4a4ec599f1653ad83f *R/calculateDEGS_functions.R
02a3a85519e753e0135edd144e65a2d5 *R/export_functions.R
56ef1ef08702848c0e74d222bd7a30bf *R/import_functions.R
b56ff2b193ecba52f9ec7f3b10cca008 *R/utils-pipe.R
d272094ba589adc0a1c4ecefc6a8944b *README.md
93f875467fe54306dec54e2d9de9e408 *build/vignette.rds
c9b707a6fb15a20414e3dc7cf1d315c3 *inst/doc/introduction.R
f6bac63d94c2181675c1334a075c5ce5 *inst/doc/introduction.Rmd
a8c204dc3393a282c74fbc279e6d385a *inst/doc/introduction.html
196893b44bff0b9dfcf24f7b971a8421 *inst/extdata/influence/anansesnake_cluster1_average.tsv
196893b44bff0b9dfcf24f7b971a8421 *inst/extdata/influence/anansesnake_cluster1_average_diffnetwork.tsv
8e40aa805bce6d0a3c2b8eb9bf29f366 *inst/extdata/influence/anansesnake_cluster2_average.tsv
8e40aa805bce6d0a3c2b8eb9bf29f366 *inst/extdata/influence/anansesnake_cluster2_average_diffnetwork.tsv
d2c5a1f5698906cad8e778eda3ef42a5 *inst/extdata/influence/anansesnake_cluster3_average.tsv
d2c5a1f5698906cad8e778eda3ef42a5 *inst/extdata/influence/anansesnake_cluster3_average_diffnetwork.tsv
a59ae2b8d7af241f17c90f0cf1bce80e *inst/extdata/maelstrom/final.out.txt
250a1fe650d4ccbf0c2842fec5b351fb *inst/extdata/maelstrom/logos/GM_5_0_MotifA.png
43c56a925996eed3cd1fd2ab05111da2 *inst/extdata/maelstrom/logos/GM_5_0_MotifD.png
219379b8ba416a6942807afeab163229 *inst/extdata/maelstrom/nonredundant.motifs.motif2factors.txt
440da929c86fa5f0a0b59befed8bf519 *inst/extdata/sce_obj_tiny.Rds
2a8fba475c1d7f8612198bedc78eec9c *inst/extdata/sce_small.Rds
91cb3b1c69dea62989b0753c0280d4b3 *inst/scANANSE.Rmd
8a72ca3e34c6fcd9316e719740563e26 *inst/scANANSE.yml
fbf8f91c29270f4a2db4c3523ac12e15 *man/DEGS_scANANSE.Rd
a8ad2201457f1c0da82d22165c5aea36 *man/Factor_Motif_Plot.Rd
c393736d0d19b957c8add59ba21f8e68 *man/Maelstrom_Motif2TF.Rd
e714c5d8736ea2a23417a95599cc337c *man/config_scANANSE.Rd
5fb868d25d1dd91bf45d3fc85d0391e0 *man/export_ATAC_maelstrom.Rd
dc20581a625e8e32da11b38eb6cd0d0b *man/export_ATAC_scANANSE.Rd
a032f2a8608f4ec8b51eb77a31ab6a23 *man/export_CPM_scANANSE.Rd
bd81e628dc4a0df05efa4c45da3d14a1 *man/figures/logo.png
5b70daaea4dc09f29e2736fb86febe71 *man/figures/subplot_logo.png
dbe047db33bf628b79e8110ae7cc9cc6 *man/import_seurat_maelstrom.Rd
6186964163d93a7e9149ac6f7f93e91a *man/import_seurat_scANANSE.Rd
ca5e47b7c1e161b16024134b3a847596 *man/per_cluster_df.Rd
8f4aad003a999fae004ba9361f9a99d6 *man/pipe.Rd
0505d75076d52f9d304d0d0ac6bf19db *tests/testthat.R
872612aa51e60ab20213363be89c4c1e *tests/testthat/Peak_Counts.tsv
0dc6f7bfd540ddf7f2ac8fe21e5db1a5 *tests/testthat/Peaks_scaled.tsv
8dc03e64cd8d2d990a1deb5f08b1f6aa *tests/testthat/RNA_Counts.tsv
14a41839abc91dc1a2d866534db48f5a *tests/testthat/TPM.tsv
fd2aed4ebcc7e3b1335526839151eb93 *tests/testthat/config.yaml
618a00717acf6b5b585bbf36753fdefb *tests/testthat/deseq2/hg38-anansesnake_cluster1_average.diffexp.tsv
0143729ac5a2ee4ae480f64a506ff098 *tests/testthat/deseq2/hg38-anansesnake_cluster1_cluster2.diffexp.tsv
d8b84372fc7c9504e27547cba18ae2a5 *tests/testthat/deseq2/hg38-anansesnake_cluster2_average.diffexp.tsv
93ff3726271c857ff89d9fe1fc9cff29 *tests/testthat/deseq2/hg38-anansesnake_cluster3_average.diffexp.tsv
364eed4cc7ea798de46f7e60fa1f3293 *tests/testthat/expression_means_scaled.tsv
a59ae2b8d7af241f17c90f0cf1bce80e *tests/testthat/final.out.txt
196893b44bff0b9dfcf24f7b971a8421 *tests/testthat/influence/anansesnake_cluster1_average.tsv
196893b44bff0b9dfcf24f7b971a8421 *tests/testthat/influence/anansesnake_cluster1_average_diffnetwork.tsv
8e40aa805bce6d0a3c2b8eb9bf29f366 *tests/testthat/influence/anansesnake_cluster2_average.tsv
8e40aa805bce6d0a3c2b8eb9bf29f366 *tests/testthat/influence/anansesnake_cluster2_average_diffnetwork.tsv
d2c5a1f5698906cad8e778eda3ef42a5 *tests/testthat/influence/anansesnake_cluster3_average.tsv
d2c5a1f5698906cad8e778eda3ef42a5 *tests/testthat/influence/anansesnake_cluster3_average_diffnetwork.tsv
12bf3f96fc32cd7df4bdc8adb700daf5 *tests/testthat/influence_assay.tsv
5097465f9e2c482a2b14f90c71759110 *tests/testthat/influence_table.tsv
250a1fe650d4ccbf0c2842fec5b351fb *tests/testthat/logos/GM_5_0_MotifA.png
43c56a925996eed3cd1fd2ab05111da2 *tests/testthat/logos/GM_5_0_MotifD.png
a075489b8624736045230bdb2351affc *tests/testthat/maelstrom_table.tsv
7ee6c4a54efa3024729f8a9a83c76c69 *tests/testthat/motif_intensities_scaled.tsv
219379b8ba416a6942807afeab163229 *tests/testthat/nonredundant.motifs.motif2factors.txt
9c6cbe2449b7c803b99e50381e1ea70f *tests/testthat/samplefile.tsv
7706fb245fb79cc0efd376e2e774d5b8 *tests/testthat/sce_Maelstrom_obj.Rds
565488a3289fb7385719e03f0bd2c33a *tests/testthat/sce_MotifTF_obj.Rds
a625b22589164d08c6dd95e0507ef3bf *tests/testthat/sce_inf_obj.Rds
0c47c0f09a754a8b94836ada01ee27b4 *tests/testthat/sce_obj.Rds
3fc94e6042706b3c0780509dec6501e7 *tests/testthat/test-Motif2TF_functions.R
8fea01db0ea91253ef44fe8bcd133ccf *tests/testthat/test-calculateDEGS_functions.R
ecb2ac6250cb1bc93af2a09ab967baa3 *tests/testthat/test-export_functions.R
66d8e65b05642c34596d341e3d558f74 *tests/testthat/test-import_functions.R
f6bac63d94c2181675c1334a075c5ce5 *vignettes/introduction.Rmd
