74cee0233d07cadc006ecec0e45ef5c3 *ChangeLog
520001334cbf959319a9984478d58abf *DESCRIPTION
3907960490da214cb993ae158ecabe5a *LICENSE
089b2f52124bfeaaa99eb23017d288c6 *NAMESPACE
f16e9f6eea5d7d72c4e7053ed14c5644 *NEWS
4984d55c072c6072c580d8592d443561 *R/assist.ado.R
b11967dc9a3fb19ff78d96b0b79d6768 *R/assist_NB.R
6b9016defaf9ec8d20ab3e300feabf0b *R/core.R
800315bc273ce9cfecc5eb146c98d316 *R/dissim_functions_plot.R
2664c2ca356651278ec9019785a55523 *R/group.Taxa.R
978db0bc09f686f44c481d2e717bd739 *R/group_CLUST.R
b6b8e2d7a5cac981081f01c8adb48491 *R/internal_functions.R
77c732efa11f3593e80d44c0148b7314 *R/metadata.R
c06f20da4559e9a9dae9b74bc785c89d *R/network.R
07c38342bc7655894694db8c91217402 *R/ordination_functions.R
ae42f0f30c9a6388c11f79801a171aba *R/phylo_taxonomy.R
f472c67cf9fecf3aa68c2b238d844757 *R/plot_heatmaps.R
9aa5fa1dfafebea2478312b0fc49eb13 *R/plot_misc.R
0ceb410edb862d9a37689e9753916e20 *R/process_data.R
42cc0e5a5dcfb57ae8dc9faf56bb3185 *R/read_and_write_files.R
6ef924dacfd3fc0c3a0ba1f8c55cd08a *R/seq_var.R
58e8b399a742dfca1569986db9596ef5 *R/summary.R
8f591240f8682d379417a8defe9c6617 *R/taxonomy_functions.R
29ccecefa91a358ead2428fae447ba40 *R/theme_ggplot.R
e3c0a7a2c434f6ab196554f4bc8b0405 *R/utility_function.R
485d6736f310ac3afd8df11949de5dc2 *R/validation_functions.R
555cd1900e378c83ccbe0b6aa977a88d *build/RAM.pdf
8a702020b7bde53c9a42d3146858fcb8 *data/ITS1.RData
13ad7e9a1b3e639eeac751f1fb74aa30 *data/ITS2.RData
e94366424aefe9da6e99c461c9abfbfb *data/alignment.RData
e1238ea72e3f23ab1d0707a7ebe34392 *data/meta.RData
a8ebe0aec69e76bc4849031a55502f28 *inst/CITATION
d61e8259e4b2f38c3447de2b2dfdc19c *inst/extdata/map.fortify.list.RData
6b8bb8afbb3c1090e21c2ce55c348fea *man/ITS1_and_ITS2.Rd
3c104075589a41e02854ac5c9b49d778 *man/LCA.OTU.Rd
bb819730af7b795828c13f7dc3b79094 *man/META.clust.Rd
205b683464300f1ec9c40da2646a5118 *man/OTU.diversity.Rd
ab149bb66622bae139c4ab789976fdc6 *man/OTU.ord.Rd
53e45b42c5117fcfe4691d08c8b89029 *man/OTU.rarefy.Rd
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ddabae26513090ab8a702150a9abb2df *man/OTU.subsets.Rd
a32ede6dcc81cdb05f3b3505b7918476 *man/RAM-package.Rd
711d374ee24abc55cdcd03cae394b843 *man/RAM.dates.Rd
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c4a2607238e06cca3e22667bb0129f3a *man/RAM.input.formatting.Rd
979cb7ad9e87eb8aa7efbeba9985860c *man/RAM.pal.Rd
0dc3e9cecd6b1c27439da7f8f6887fd4 *man/RAM.plotting.Rd
b3cc179f0760b54fcb59ef85dfcaca0e *man/RAM.rank.formatting.Rd
63d93c68113725610656002370d4797e *man/Taxa.ord.Rd
3a2775c29238c6130e15c04aa34717dc *man/alignment.Rd
ba76418c7ff62294268fca44ecf27314 *man/assist.NB.Rd
60fef12a6422082b3c400d382d1fefff *man/assist.ado.Rd
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9c71863c14ff6c85a8fca051d6f5d8f4 *man/col.splitup.Rd
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6caa54adf9d5a9eb7f8319905a62db1f *man/core.OTU.rank.Rd
16491feeebc2f4768d1447e3c8e07209 *man/core.Taxa.Rd
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8d9fe022b630e04a6f214afd7aea6daf *man/data.revamp.Rd
b4b6f635f4d5de40f913ed8adb1cde05 *man/dissim.Rd
8194a633aa53bed62d54af79d82964b3 *man/dissim.heatmap.Rd
7fdd51e8a0e0303ed845fd87b6e53a8b *man/dissim.plot.Rd
3a934177c66bdee81487197863744d51 *man/diversity.indices.Rd
5cbfa00eecd0b327095ec1aa88e44fda *man/envis.NB.Rd
4c170c3ae5dc1d928427806ced87d3cb *man/factor.abundance.Rd
e096bb998f6f9b95a482b3cf87509099 *man/filter.META.Rd
5c7784fb54ae6be8d48d4c345416ddd6 *man/filter.OTU.Rd
ae12e63305e2e8fb0352725e5426c296 *man/filter.Taxa.Rd
42a9980915882d3b9ef46127e272dc9e *man/fread.OTU.Rd
0c547faba36108f2ac26083030c3975c *man/fread.meta.Rd
d6c8d1d2214f8a93c142024116d2e00c *man/get.rank.Rd
5c6bb2543792840f66fa05c406fde97f *man/group.OTU.Rd
b36fd8f5ad3901218a95d7fac8d4b7ab *man/group.Taxa.bar.Rd
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283f622230399faed6b91857be8c386f *man/group.abundance.Rd
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6d26c63ee8798cddfa4b9b791226586f *man/group.heatmap.Rd
19c0a6192652e5d2f81766793a64d60c *man/group.heatmap.simple.Rd
818ebd3565f6578b8c2c5b6dd42b9395 *man/group.indicators.Rd
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6a3ed61ee2ec522152d58924cb56d940 *man/group.temporal.Rd
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ec1552b469dd9523a8bdc81c14584c6f *man/match.data.Rd
a3daaacfcd2a0905c9cdbbf192fbcec6 *man/meta.Rd
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b34e8177e3d8c1982ac3467eb9f95261 *man/pcoa.plot.Rd
b684a675a0c5781cee88b6da3db6e657 *man/percent.classified.Rd
29490e17c34c836ed3bff66ecba03786 *man/phylo_taxonomy.Rd
973ebfa6632c7a44a718327e7f150d66 *man/phylog_taxonomy.Rd
289f764f3b7ee84748eba92ed89998bb *man/read.OTU.Rd
c6929f5aec429ef38d7090bf8f01c430 *man/read.meta.Rd
7e8e663d020ca5352eb7d114e4e0310d *man/reset.META.Rd
7089bff54cd6ee2471d5360e18992056 *man/sample.locations.Rd
ac84ccddacf88921066091fbbad49321 *man/sample.map.Rd
7e6a7f130a357aa2ca140197d9bb0a39 *man/sample.sites.Rd
c2a01f7a63aab8da2e1db473f33feef3 *man/seq_var.Rd
389610142367a28534e4e424c29df00d *man/shared.OTU.Rd
b145586ce26b15344390fe8f7f5f98ef *man/shared.Taxa.Rd
5e6209c9ec64585c211666d177762c6a *man/tax.abund.Rd
b0721addfc5a6e057b1622d3857b4cdf *man/tax.fill.Rd
50c43a838acd4502c1c09cab67bde485 *man/tax.split.Rd
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a78b9b780a19e1526c8cf3f37b8c01de *man/top.groups.plot.Rd
aa324bb65319f9eab113eeddfaa9b250 *man/transpose.LCA.Rd
ab7ec3615de1a7904e78910f15fd5715 *man/transpose.OTU.Rd
09bcd8313d5057359126f47a2b9e532e *man/valid.OTU.Rd
9ca7eb46f5b113f6df4171272685c49e *man/valid.taxonomy.Rd
e9c3048344e9cf16b60348b5e9de2aaf *man/write.data.Rd
