365ca59e0c538e9ee1ccb2138e1447bd *DESCRIPTION
6ee8961d9954684f94fea9c437fc2809 *NAMESPACE
4e00aaebb06b3731f1d113071cc65b62 *NEWS.md
105bfd779fc801e443dd1679fc2a7e9c *R/AuxFunctions.R
f2aeb8706f77bf6fea983eb0d4d80c14 *R/PMatrixClass.R
5060aa15f8ea760761578b42dbaeaf4a *R/discoversomaticInteractions.R
eddd17682b6bcb229a08b3d86f79921c *R/getMutex.R
6e70638d14d04c9187f14cc1bd32d544 *R/getMutexAB.R
9285eb0632fe81b890215fe337b0cb54 *R/getMutexGroup.R
2ec1e3ab4465489b5b54cc7a36490ebe *R/getPM.R
8d9f01bb89e6f5195b07945f3b131684 *README.md
3938b12b005ec3c9bbbc127c39f05448 *build/vignette.rds
2b3baeb12b90e50729548fe06bea0249 *data/AMP_COAD.rda
efbd0cfefdff70d714be50072f9f5725 *data/A_Matrix.rda
db0fde74fe10f66ca7342f967edf2ba3 *data/A_example.rda
7fcbefdfc9ae52be9dde4a1ddbda02d6 *data/B_Matrix.rda
7c781b77d87fbcf9eac1f1176f02148e *data/B_example.rda
421171f793da5a2dcad09ddff67ce7b2 *data/PM_AMP_COAD.rda
57050075ef21c6115aaf1045bd6b1b2e *data/PM_COAD.rda
dfdea3b63099f0a58a0985bdddc2bccb *data/TCGA_COAD.rda
98abdd26bc359971be3f10dfa0fdbdce *inst/CITATION
ecca1c7c337fda72b685a43d60285923 *inst/doc/Rediscover.R
57a2ff59e6eaa080e57445af82f5e555 *inst/doc/Rediscover.Rmd
31480d3a9db6033c3ae58e03f873195f *inst/doc/Rediscover.html
d69db0f5896950609658486e7c0e3b2b *inst/unitTests/test_discoversomaticInteractions.R
b6de69987c3998f1455225f51e2888dc *inst/unitTests/test_getMutex.R
7f64f992e2f534654a1f45eeec2c5996 *inst/unitTests/test_getMutexAB.R
21af5c0eecbaf460d3ed43642925e122 *inst/unitTests/test_getMutexGroup.R
8873e902b6e0cd69c1eb8ec513b5d9c4 *inst/unitTests/test_getPM.R
e619f0fa7fa1d608108b9616e1af1504 *man/AMP_COAD.Rd
aba7ce98466111ea9190cb24a041f40c *man/A_Matrix.Rd
5f1935d398fb87960debe1aa31598193 *man/A_example.Rd
2439f8fd1d253c4d4b95fd6cf308195d *man/B_Matrix.Rd
511a527dfaadecca60929c5f2a5f4c8e *man/B_example.Rd
cd13eee763f92a01469b24859ba705b1 *man/InternalFunctions.Rd
5ee57161bec71d6d73b9f361938a9817 *man/PM_AMP_COAD.Rd
ebd01e34b59672707100af5641437b99 *man/PM_COAD.Rd
191a19886c695a307becd8bbb5952443 *man/PMatrix-class.Rd
08a65d9bbf22e49f619c5e0220085053 *man/TCGA_COAD.Rd
0c624c2d44ce2319d12b15658c3b8b8a *man/discoversomaticInteractions.Rd
ef558f7d2c29147971187b8330dc981b *man/getMutex.Rd
5ce048ea79799b2e7ad94d42f7bd29f6 *man/getMutexAB.Rd
de483f8f1f6a4aad69f38621e6749a30 *man/getMutexGroup.Rd
8dfe137f9d2530672051b032a773a7a5 *man/getPM.Rd
7bb83f45fdcc62b5df8d6e372a906732 *tests/runTests.R
57a2ff59e6eaa080e57445af82f5e555 *vignettes/Rediscover.Rmd
8db0972cdb406680a6f36cc898df3b2e *vignettes/coad_discoversomaticInteractions.png
fcf82d451b02591ab09db86b52b14abf *vignettes/coad_oncoplot.png
e55463567c5836472536df59e7e4f3df *vignettes/coad_somaticInteractions.png
e1dff25fc6e0cb9d6ef619d810edb0b4 *vignettes/flowchart.png
