87377c16546f639b6664ec6919ca50ec *DESCRIPTION
fe2c07ea54e8bca91c22127e1d42ee81 *LICENSE
a281105dfab87e7cde777ee51db02abd *NAMESPACE
42be1d2276e006db35cc2ad6a8e604c5 *NEWS.md
4a591abe6207b4ed9939f383f300380f *R/CorrelatorDocumentation.R
ec15618c98554f77d013b9575f9d7ef6 *R/Emulator.R
cbf5f7b0a763c4ee0aa2ff7f3fd0ce6c *R/EmulatorDocumentation.R
f30a8316d6c91c81f40f9fa866d1a400 *R/HierarchicalEmulatorDocumentation.R
57fdd914d3d222dc2d61987b0bca46db *R/VarianceEmulator.R
6e8b6dd9080b943b89040babbab57269 *R/correlations.R
bdf8056e037cb2e1af16b74e0a4ce87e *R/data.R
143af1debf64741beaa37c528984c0cc *R/derivative_functions.R
5bc2731f5d2d5887dcf5a8ed57d68251 *R/diagnosticplots.R
863b16215048b94f1b803ecb601c62ff *R/diagnostics.R
11c124eead9dacd39dddfab532e02b7c *R/fullwave.R
95ed7f208f722ab38a46b5e22c54e046 *R/genpoints.R
03c85db2a87a28d75ba4b0a7e91cbb7d *R/idemc.R
f5f8b4de41ca8d10f69a4e32bb76b00e *R/implausibility.R
69426878926053cabb1ac875f821288f *R/modelbuilding.R
434f0f7d485c7345f700d39277526e47 *R/multiwaveplot.R
594dc21a522848b64058d515f1808019 *R/plotting.R
049a69c99961178178fff06e0805af12 *R/utils.R
07be53fcbff0404c3955e98cb6333f99 *README.md
59d98b6a01e1b8cd8aee78e687e64fb6 *build/vignette.rds
cf6563597bc80bcc76f012527950f860 *data/BirthDeath.rda
af11d8f6b369b17adf2bdd1ec4068520 *data/SIREmulators.rda
19bcc8fa0b9973de9737a2385ac4f44a *data/SIRImplausibility.rda
826528050ff72a91bfe6693c027530b4 *data/SIRMultiWaveData.rda
d155c8868ff613fb2f2ef6f63a4ec594 *data/SIRMultiWaveEmulators.rda
769d7e5e356a618a2ce3f29d52fb29c5 *data/SIRSample.rda
7d6b6f1e386f3356eb5ae6a1e733eacc *data/bimodalData.rda
956f88bcdfed2d96bb45628c704428e7 *data/problemData.rda
aeba3ad51506c0f2b16db61b95ff2070 *inst/doc/demonstrating-the-hmer-package.Rmd
082b3230c3f72355c583267b478194dd *inst/doc/demonstrating-the-hmer-package.html
5135626044e97fac23f8df67ba112760 *inst/doc/emulationhandbook.Rmd
8ee1773aeca093460abe61c1699da7f8 *inst/doc/emulationhandbook.html
16722a713a0a7c804bc6185385e51aae *inst/doc/low-dimensional-examples.Rmd
a088fb020dccdb450444702e98e0e53d *inst/doc/low-dimensional-examples.html
769e1317e9e536116da0c1abda193043 *inst/doc/stochasticandbimodalemulation.Rmd
45592a0f18dff4b5e1cbd42c758fcb7c *inst/doc/stochasticandbimodalemulation.html
21c5a85dc4606f80f3321d2eb92820ad *man/BirthDeath.Rd
a54e871b6f97f8780462cbed161e7730 *man/Correlator.Rd
d5c899e3a12d8ffb5b17ecb1f8f41783 *man/Emulator.Rd
19deb5bf8511c2ac076dca8907335e46 *man/HierarchicalEmulator.Rd
c8d6c5a14a6ca1fbae99267172ff3beb *man/SIREmulators.Rd
2c1658afd5dcaf98179014cf010aeb74 *man/SIRImplausibility.Rd
1570a27b751e34d291eef71777f125f0 *man/SIRMultiWaveData.Rd
02a95744ad2866b89149d402b93469c8 *man/SIRMultiWaveEmulators.Rd
b016f3b7f4149eb41a0ffbed16fcf5b7 *man/SIRSample.Rd
75555f6254c82e96ae7b5136f0595446 *man/SIR_stochastic.Rd
ae8c123fb56c01957e267a4fd5a5af96 *man/analyze_diagnostic.Rd
a60159067d5ff0bbbc010594a6cb79a4 *man/behaviour_plot.Rd
5b7d6ba51e3997c8203636a29810b90d *man/bimodal_emulator_from_data.Rd
24501f3c73ff751ebc01a73385c76341 *man/classification_diag.Rd
ef8cfa2526fa140da7c571605159d5e4 *man/comparison_diag.Rd
ebd8731069ed6e5a2bb614a42c20fb86 *man/diagnostic_wrap.Rd
55ded85ee09d17898310fab9b3e400eb *man/directional_deriv.Rd
9f7c74793c17a5c60e8f1d016aef6d94 *man/directional_proposal.Rd
79608ff39a1b4c321a8387d14793ae6a *man/effect_strength.Rd
c78624b2ad91c511649f33fbd5ae0de9 *man/emulator_from_data.Rd
a763c0c68ae889ae241a7ce34c1efee0 *man/emulator_plot.Rd
9abef394b73c12cbf30fb9a00dcc96b2 *man/exp_sq.Rd
c410b6756ef3432a3720145b4d34a1c5 *man/figures/logo.png
dbe8db47eec9380e44fdb8987817ae6c *man/figures/logo.svg
f10ba7aaf369fc4d39ba7b235cb3fa7a *man/full_wave.Rd
4b012a982ce9957baa4875a9ac35483d *man/gamma_exp.Rd
3d6e9e702e6234d746ee785285f1dde0 *man/generate_new_runs.Rd
aed094dad02318e0aba93a1f01f3223c *man/get_diagnostic.Rd
ddd9847aacd4e3318062d65bd0881c11 *man/idemc.Rd
779732c15753a1fe52d64dc7ceafa70a *man/individual_errors.Rd
8004cd334c943bcfa9175ec8deefe7e7 *man/matern.Rd
061ba5bc517e98a52a28e9f524d2492d *man/nth_implausible.Rd
c3efb4cfec02a30d6e8c5e6c82839b2e *man/orn_uhl.Rd
9eb16c770fe436c350df4e4e12c564f5 *man/output_plot.Rd
efc90d578f8e36121d3a53c7425b3a47 *man/plot_actives.Rd
6898e06e849795663b43515b61472404 *man/plot_lattice.Rd
0b2c9c2bd85a2b61a3cd1b78e927f0f8 *man/plot_wrap.Rd
7bf43432cb967c2036bcec177389403c *man/problem_data.Rd
9ec79c477abb40b224a1f85ab1e9fee4 *man/rat_quad.Rd
f41e0a06851fb17c797d4644653e8634 *man/residual_diag.Rd
0a1ef4c5943297ff10ea8f16c3bdd98c *man/simulator_plot.Rd
58abe01b6f1e2423815d921fa048af7d *man/space_removal.Rd
3c168356ba28461db2af906362bf49dc *man/space_removed.Rd
975adea8f5382a2faf5a5b710be5e68c *man/standard_errors.Rd
2f0eab524abd5c0f9ec63a0a7b2ac376 *man/subset_emulators.Rd
b89ca6195e7394343c4a9b7db638cc00 *man/summary_diag.Rd
6510f8e5652ca8e23e5c609cb4811255 *man/validation_diagnostics.Rd
1f582d2c77e407cd4b02d2e7974056e7 *man/validation_pairs.Rd
b5483d6a1c6d5b576bfe2fa6299325cf *man/variance_emulator_from_data.Rd
dc725c509c27cc7ad80b739a37c3442f *man/wave_dependencies.Rd
a06be448071e975c99baf0b67d4d2814 *man/wave_points.Rd
abdb2968f417714c103520a7f52cddb5 *man/wave_values.Rd
90b58b096f0fa1fec4fed9c329c184d8 *tests/testthat.R
8de3ccedb791d261e1286066b9562406 *tests/testthat/Rplots.pdf
66aa5a8a36803732adda97ce6b5293cc *tests/testthat/test-correlator.R
50ffe9c85da654362a389979fcee3e37 *tests/testthat/test-derivative_functions.R
9a95259c2d6acb5d9929c516bbecd0d9 *tests/testthat/test-em_building.R
30bb032edf019aa389f277264dc53cd4 *tests/testthat/test-emulator.R
d6fbee06a2d79194e8bb24b7588e986c *tests/testthat/test-emulator_admin.R
74357ffd101e30f2b778b858bc986783 *tests/testthat/test-exp_sq.R
1905ed9056f018d44a31f7d38c14fa17 *tests/testthat/test-gamma_exp.R
1525c2d3ddc4157600162fbadc69830d *tests/testthat/test-get_dist.R
7636fa44548a8f4bd04ebbfdd46129ac *tests/testthat/test-implausibility.R
02732044a9d37b9a2fe0bd5891be07dc *tests/testthat/test-kurtosis.R
1cacce562db3011d1cd28157c30fec86 *tests/testthat/test-matern.R
4c7d31c3e7b3a02f107f55169ef67f97 *tests/testthat/test-orn_uhl.R
0cb6d6f8674c126340e6e8058862aea4 *tests/testthat/test-plotting.R
373c1395e62ee580ced1cd8a5eb08aef *tests/testthat/test-point_gen.R
1d7bfa1f337616aac599512b9bd17351 *tests/testthat/test-rat_quad.R
eecd0e71255a5fbdbc20f0b6066fab9e *tests/testthat/test-scale_eval.R
c0e6bf6e01d8cc26a07ad00071969482 *tests/testthat/test-validation_diag.R
eb015b14a684fa8700279a4da8cd931e *tests/testthat/test-variance_ems.R
48734ce41095c89bea72f1f855f5c2c8 *vignettes/demo-em-plot-1.png
43f1b0a23614bea396e9e3d10731d580 *vignettes/demo-em-plot-2.png
c4a76b3a4735672b917ffee0e8484a0e *vignettes/demo-em-plot-3.png
04158fdfbe8f81768b874a65254bc2fa *vignettes/demo-em-plot-4.png
d5c1d38fd0299a4281bf1797bf5a42ef *vignettes/demo-em-plot-augment-1.png
69a1af416da378ad626bf3272ca934b0 *vignettes/demo-em-plot-imp-1.png
efba1e4b0bcf461ea16723277f536316 *vignettes/demo-em-plot-imp-2.png
38142098f0c9583be739d78c128d8ab0 *vignettes/demo-gen-new-runs-1.png
b804397105f0c01bdf0d1ea3e63fdfd6 *vignettes/demo-lattice-plot-1.png
94fad7e48b4e57e3f7a5cf2906d216d0 *vignettes/demo-multi-wave-plots-1.png
7c18224ed166310cc9f0fe7b530e694e *vignettes/demo-multi-wave-plots-2.png
cad9054ef655c905cbc2b24a54dfcb44 *vignettes/demo-multi-wave-plots-3.png
91388fd7b4b2ea2e073fabf44c565e8a *vignettes/demo-plot-waves-1.png
68dffdfa56b5110b78da79e72eff1937 *vignettes/demo-space-removed-1.png
b0fc8e54e259fad90c4fa621fc0db5b9 *vignettes/demo-validate-1.png
aeba3ad51506c0f2b16db61b95ff2070 *vignettes/demonstrating-the-hmer-package.Rmd
8f86abd41977b128452256f711ac523e *vignettes/demonstrating-the-hmer-package.Rmd.orig
5135626044e97fac23f8df67ba112760 *vignettes/emulationhandbook.Rmd
9d9cb4d43767a029d76cfae290d857ae *vignettes/emulationhandbook.Rmd.orig
a007fbfb08348bc1dc84830a6d086a63 *vignettes/handbook-bad-design-diagnostic-1.png
cdd66ab3b89f0e12e853dbd84befdd8b *vignettes/handbook-bad_design_generation-1.png
335997b9dce43c88c6f75724f04c6a9b *vignettes/handbook-behaviour-plot-1.png
04ea640539eb9eec493509662b9957a5 *vignettes/handbook-behaviour-plot-2.png
38458a78fc19aaeab22c3c4c56275ca0 *vignettes/handbook-check-output-1.png
2a7edfc950789843520537ba34e80efd *vignettes/handbook-check-output-extra-1.png
9ccb8bb7fbe0d29cf183d59c3c0fdfd9 *vignettes/handbook-dirac-delta-1.png
5504eb915500ba60fb911d782b706922 *vignettes/handbook-logit-example-1.png
93425b57e31a82b714e7c76450bda960 *vignettes/handbook-output-active-1-1.png
5acdf1739d11fcddca5b44f21b7f0c24 *vignettes/handbook-output-active-1-2.png
8231d625fd60ea1ab2f71a42a40a223c *vignettes/handbook-output-active-2-1.png
f9dd9ce9c18931c008497e7452437a8a *vignettes/handbook-output-active-2-2.png
d86e6d0695a992296ae74047f2823efa *vignettes/handbook-plot-active-1.png
524c6d9b861c72b06795c55baba34ab1 *vignettes/handbook-problem-imp-1.png
8dbebf5fe2482b7f43347f9e6d0301a1 *vignettes/handbook-transformed-imp-1.png
16722a713a0a7c804bc6185385e51aae *vignettes/low-dimensional-examples.Rmd
e3f270e32d7787426c65686ffe42ded6 *vignettes/low-dimensional-examples.Rmd.orig
69b10b10efa92332923385c4ac228913 *vignettes/lowdim-changed-2d-validation-1.png
a4a3b7daf8be624888f7ed6eb55f5fd2 *vignettes/lowdim-gen-1d-points-2-1.png
38d27fa7171c9f5215a47f38ca2f31cf *vignettes/lowdim-gen-2d-points-2-1.png
c7249a3f1ec45eb6b7edf56168ef8c5f *vignettes/lowdim-gen-2d-points-first-1.png
1a99f22d30f6b099bf6eeeb9de295adf *vignettes/lowdim-plot-1d-first-1.png
877b634d8cb4dd00bfd581b30e8b9448 *vignettes/lowdim-plot-1d-results-first-1.png
c15914406984e34a5a19083484d7c0c9 *vignettes/lowdim-plot-2d-ems-1.png
429a9972845ae75e991e8ade40233e3c *vignettes/lowdim-plot-2d-ems-2.png
e2075dd8205694795a00598a7853b3a7 *vignettes/lowdim-plot-2d-ems-corr-1.png
9bb45da8ab007ba8e1a99554a4ee3d1e *vignettes/lowdim-plot-2d-ems-imp-1.png
4b0b7ed8c959151ad258e2aa7c8ebc90 *vignettes/lowdim-plot-2d-ems-imp-2.png
f8ce9754297f84e4569a1a6d73fce09e *vignettes/lowdim-plot-2d-ems-with-augment-1.png
1b2bed4ba2326b0d3d6f15641035fe5c *vignettes/lowdim-plot-2d-imp-2-1.png
03a673ac15d914235106858a4c8f799d *vignettes/lowdim-plot-2d-waves-1.png
fd949af614b6ec23a27d0622134ba0a4 *vignettes/lowdim-plot-2d-waves-2.png
c67040dbc53430f321b608bb8301d38f *vignettes/lowdim-plot-2d-waves-3.png
c1d1e324910067572aae0f7c3176a1d3 *vignettes/lowdim-validate-2d-ems-1.png
0b324cd5a4b0f572b57efee8650b550a *vignettes/lowdim-validate-2d-ems-2-1.png
3ec5b647eaa35ced7b50f163ba917f16 *vignettes/lowdim-wave-2-1d-1.png
8f643f3d537c4149b7e474f1ce9ddc28 *vignettes/precompile.R
bdb8d35672bb2055d29951a494157e0a *vignettes/stoch-bimodal-demo-1.png
5d2d15971d157b5aad123f61d376cd40 *vignettes/stoch-bimodal-imp-1.png
dec62de716cfdbf1861b031674de78fe *vignettes/stoch-bimodal-indiv-imp-1.png
5d08378cfbb52875784f0df5a0ad8001 *vignettes/stoch-bimodal-indiv-imp-2.png
dca36b2c696ae8ba14984223e5906c5e *vignettes/stoch-birth-death-plot-1.png
374d378d52fa6df1924a4f651ded4f07 *vignettes/stoch-plot-bimodal-1.png
91f9054d550deb8bdef778ee4cab7a3f *vignettes/stoch-plot-bimodal-2.png
8cd230a9a976f8fdf391fc2755a702ef *vignettes/stoch-plot-modes-1.png
7a8895d3094b676f3b5994a481c2c400 *vignettes/stoch-plot-modes-2.png
f2a466b8651b851727f0afd8c024d111 *vignettes/stoch-plot-stoch-ems-1.png
00ce4e9c438f97108c245ed6de8aba2b *vignettes/stoch-plot-stoch-ems-2.png
9104fdfb177fe6e3c0e7ac26b93eae0d *vignettes/stoch-plot-stoch-imp-1.png
b2a6a60b314d186643f185773bbaa9e0 *vignettes/stoch-plot-stoch-var-1.png
f6450a400e91846593d5e9f210c1e1ce *vignettes/stoch-propose-bimodal-1.png
234d9d38aac3d31a5af50db8647684f4 *vignettes/stoch-propose-var-em-1.png
53e654a9693e58227215cd433a2c2c2e *vignettes/stoch-validate-bimodal-1.png
8734f4d5f3cfc8ea784860d6805caf34 *vignettes/stoch-validate-bimodal-2.png
13fa929d62313edc29012a8cde153885 *vignettes/stoch-validate-stoch-em-1.png
baf9fcff942c58c69316e2efb0dfff3b *vignettes/stoch-validate-stoch-em-2.png
358846d8bff8bf1f14dd5dc692a75384 *vignettes/stoch-validate-stoch-em-3.png
93913cd625c06f9b7d8f32f83eea404d *vignettes/stoch-validate-var-em-1.png
769e1317e9e536116da0c1abda193043 *vignettes/stochasticandbimodalemulation.Rmd
c8a3a7263af23a6b1ee5480ed3d02a44 *vignettes/stochasticandbimodalemulation.Rmd.orig
