19580ea6de79527b84fc3a5e958b813f *DESCRIPTION
5d82e9946ace180a66d2fe6db26780f1 *LICENSE
d32a1d4f50a035ff9b8d2b89e1084e81 *NAMESPACE
d315bd0478e85c16cd0f3b1dc6b9aa57 *R/RcppExports.R
e0e8f4c1516202bc4e07cea47c06fa22 *R/calculate.gene.rank.R
93c096d91e635d0760fc07548343853c *R/data.R
3c123d90a667dbf89091dade63e0fe11 *R/inferCSN-package.R
fe0dac11a788664fa3e823e89c00f54e *R/inferCSN.R
0e2e3982f47595db373b284328ea0176 *R/network.visualization.R
6c4f3705ee09709f4934d5f05b934f1f *R/performance.calculate.R
cc0de4ed7ff28cf8ff971a0debfe21a4 *R/sparse.regression.R
83388bec19de0fc9a7f666c5777ba005 *R/utils.R
12848ae7db3e0111eafa7ef894523666 *README.md
2b55dc47c2059b70a2bd23c2d432c750 *data/example_ground_truth.rda
24c5cd3136af4400250e4f1ff753532b *data/example_matrix.rda
2578bd710b697ac23ad192dae42fb6bb *man/acc.calculate.Rd
f4cdcc8e17f628c413d1fa359e8ad538 *man/auc.calculate.Rd
84a5160478f7af1a289e7fd127232bbb *man/calculate.gene.rank.Rd
2ec53a0f4a4b6070a92e031b5076fa5e *man/check.parameters.Rd
852b7ad289881bacb30cf00b6d636f62 *man/coef.SRM_fit.Rd
ae3dae8d622c792f1406a75153bc25a0 *man/contrast.networks.Rd
fd98c1624d8e41509f9209d60fae8e52 *man/dynamic.networks.Rd
bea92ebfc3cc63a4375cd260d58a1e42 *man/example_ground_truth.Rd
369f179d33e62b3546d42b46591e907d *man/example_matrix.Rd
4cde6e83b2d3b96a27c12cd1ba8e0091 *man/figures/inferCSN.svg
13d14f85d5b3651b4f96e5fc502a59ad *man/figures/logo.svg
0f5254bb75bf52424f3da9201427affe *man/filter.sort.matrix.Rd
660b9f63753b32fb314e0b0426641a72 *man/inferCSN-package.Rd
694d0f11897c332cd4c85a362d99449e *man/inferCSN.Rd
2bc5da6085decce830a9ae5a868eefc9 *man/model.fit.Rd
26ea05c707c1cdc7d9f4d33a358c3541 *man/net.format.Rd
ead454b1b88d2b3679d9483f648b4238 *man/network.heatmap.Rd
22eb496af3e810feecd27c03bb334610 *man/predict.SRM_fit.Rd
323bf94a8a8c9b21ca80695bc7a3b7c5 *man/prepare.performance.data.Rd
97db8cfd5710b3f88301b3228c1c8ab7 *man/print.SRM_fit.Rd
4be9183d647ff5c6a3498e17d2e35f9e *man/single.network.Rd
1abad38810d25683403a8ea9a5909e7b *man/sparse.regression.Rd
28ae3951d7e466b631e4384096cccecf *man/table.to.matrix.Rd
0347ffda63bae663f9354d1e0b948d57 *src/BetaVector.cpp
dadb1987bfb2f80d199a2e25b02a051d *src/CDL012LogisticSwaps.cpp
64737baec03e2641f58d5681381874d6 *src/CDL012SquaredHingeSwaps.cpp
6a4f677eff1881a88c670cf19c77773c *src/CDL012Swaps.cpp
d4f2e65104193ad8b04b23281a39cd8c *src/Grid.cpp
2ebc2a8b814581ce38dd0a53cf275ce5 *src/Grid1D.cpp
8748c274ffef69c8dc7f2c0f88228b22 *src/Grid2D.cpp
de248aacefd130f4c49b6e581d056686 *src/Interface.cpp
c2fbbe606dbc01e99513a08efa77bb27 *src/Makevars
c2fbbe606dbc01e99513a08efa77bb27 *src/Makevars.win
41bc93afdbfbce896558b943b882d7e7 *src/Normalize.cpp
fb4ab9386a76250a1012fc799738465f *src/README.cpp
5b2f7edf897fc18eea5f604275d365ef *src/RcppExports.cpp
b8da420687f2f9943625f9c8cddda799 *src/Test_Interface.cpp
e447698f0493b967abd0e0aaf2eca2c2 *src/include/BetaVector.h
e9aab72b23846ad7db4b0fa1e2597d09 *src/include/CD.h
3006562807501591e7979d1b5af7c039 *src/include/CDL0.h
c9262d8cc37f5ad121511ab15f1ef234 *src/include/CDL012.h
da6865571ac3a696ef96d8d10c8b7c9a *src/include/CDL012Logistic.h
c36020aa6b5463f99a6265a18d745473 *src/include/CDL012LogisticSwaps.h
75978be275c2af4e57318dda1d2ee505 *src/include/CDL012SquaredHinge.h
6acf66ba1b050b4869097aa56ed7cb10 *src/include/CDL012SquaredHingeSwaps.h
8d625ee2d1001e5fbd827359787faa78 *src/include/CDL012Swaps.h
3c65caa73f70506f9914640898d13c6a *src/include/CDSwaps.h
3e191a22fe2bee08cfd53dd8cd32f8a1 *src/include/FitResult.h
fa0e95061a24b8e548c611d4304664d0 *src/include/Grid.h
1e34795fcfd7f91aa821223794050e00 *src/include/Grid1D.h
5155c4b89da70421f47b4e82a0111866 *src/include/Grid2D.h
5f89a8eaba4ab540eb63046a1e83dbe6 *src/include/GridParams.h
0dc02d87935e4bf4860d17b010a91bd8 *src/include/Interface.h
68b70f6c4a8c08a8d7f6bb97746d3d49 *src/include/MakeCD.h
aea94cb863ab3243b5c681f9d905c175 *src/include/Model.h
8650499eeb16d4bf88397c8ed3c29c92 *src/include/Normalize.h
cdde68a3cfff76e8a18c34209800bea5 *src/include/Params.h
0816e979947d47e1e91c6327a62d641c *src/include/Test_Interface.h
f3a3cce4a45a5306180127b28e5aa66c *src/include/utils.h
624b128f72d3cfac81caf726f91d01dd *src/table_to_matrix.cpp
82ebc8c76e0a000e5bf6e391edd49ff3 *src/utils.cpp
