b69cd4f9782e0b1e39cb0e399aea0ae6 *DESCRIPTION
725fa6ea1dd4b072a87fd6fa0a3d9a75 *NAMESPACE
917931979ef984447ac724ef9ca534f3 *R/RcppExports.R
47c87efb17f33c880d360eeeceb11e21 *R/create_experimental_file.R
6baec740003a116ab3e6bdab9e21ea00 *R/exchange_rates.R
dc3e664f820af0db7c9cfbc83eb4ccfd *R/isotopic_distribution.R
ecd7729f906db531749b5f5c950f5c9a *R/noisy_spectra.R
615e8db40f09e5cd296160d0028e2b03 *R/plots.R
aa7255568f7d54fe86858d6ab94095ad *R/power.R
06b5968c6200aaafdda9db12cf77a697 *R/powerHaDeX-package.R
eb057971b4033b5f6c452441033e1851 *R/simulate_HD_exchange.R
fbc250f819b11369f4bbcb012079bc66 *R/simulate_theoretical_spectra.R
114a5756a93775437121afd0b1e21638 *R/statistical_tests.R
f44dd512fd4f19ae34cb141793740a68 *R/sysdata.rda
6072167b7f455e60727f1885ccfad032 *R/test_hadex_data.R
8a7a6f4b8e82cf0de35ea82c2c10433f *README.md
0a15d204219a907ad71914e559ad78ad *build/vignette.rds
af8fef0a270254f4c09a66e836419650 *inst/WORDLIST
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4c603c32e3269feb78541e9ec1dd2976 *inst/doc/Simulation_description.html
fb065d01f9da02efde0728b9b45c920b *man/add_column.Rd
5bfec1258ee6a0266d9e712475f2b02d *man/add_noise.Rd
2383fe6357660d1dfa87f016e6ec491a *man/add_noise_to_curves.Rd
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52a04d133ec9c7feaf2f47046ce001cf *man/add_noise_to_one_spectrum.Rd
418cd6d8c406e7dd17dd611539b5fbae *man/add_noise_to_one_timepoint.Rd
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9ebbd865f36fc6c3ebf89e9d519437b9 *man/calculate_hdx_power.Rd
40997eab697eb3a5d76477a0913460df *man/calculate_peptide_mass.Rd
94aed5b5724ee4c7859cca2dd8494c78 *man/convert_hadex_data.Rd
23483a9bc033ddea444fb6d0be030f4e *man/create_experimental_file.Rd
4871b80ff7129550a7576ff4cfebc949 *man/fix_columns_names_types.Rd
3d4d524f17594fca4af0c0516c5d1706 *man/get_F_const.Rd
dae8691423c1ba01793f6f379786bfe9 *man/get_HD_matrices.Rd
54eebf2ad7f5af6863b7fc5804f9e8db *man/get_HD_matrices_using_markov.Rd
b743e64d34e8902d131a370c5d36873a *man/get_approx_isotopic_distribution.Rd
a4acf198416c489dcc66b01996641853 *man/get_deuteration_curve_single_spectrum.Rd
9f680c2194a15a219f9900ad4b47c9e2 *man/get_deuteration_curves_from_spectra.Rd
b544b10887f27e72a51952e202edfb14 *man/get_deuteration_single_timepoint.Rd
bc125ebb933d8b2e7131c931e9e78819 *man/get_exchange_constants.Rd
182d4b8b9cf53d7922f45b4c7df95c09 *man/get_exchange_probabilities.Rd
ee79ab47930e34c9cecf54426a4abb74 *man/get_exchange_rates.Rd
815369a6d0156bbe3b68f5b64bc956e3 *man/get_iso_probs_deut.Rd
9b8d617fa29df1a98e74533fb6550853 *man/get_noisy_deuteration_curves.Rd
81a12f0ccdc4b351613ddcf355251834 *man/get_observed_iso_dist.Rd
afcd174327f52b09c8fed740909ce8f8 *man/get_paired_spectra.Rd
2f15821a104bafef966c4339fee2a50e *man/get_pkc.Rd
51028fb6a6b74a5bb66105ace380016e *man/get_poly_const.Rd
5776a902eb89cc9296ff9875a77370c0 *man/get_relative_mass.Rd
d1c2f50c6404f0bbc00ec26f0c8cb09f *man/get_spectra_list.Rd
c3cc77f0cb9bbb537f31e8fa444d94df *man/get_undeuterated_mass.Rd
919b9fa8c77599f1269f3e4bc89aa2b8 *man/make_experimental_design.Rd
0da5f9fa36f7f90a96b366e04ad8eece *man/make_noisy_spectra.Rd
0eb2560e4b37d301d2f288a37018e72d *man/plot_spectra.Rd
89f28ecf468d9d109b5ed4aadb92380f *man/powerHDX-package.Rd
05fa07450d8298d3e494688e453a158d *man/powerHaDeX.Rd
cc686d92d5e6aaab0c67918539b0a08c *man/prepare_input_peptides.Rd
4be59139979444583124b13c3571bf47 *man/simulate_theoretical_spectra.Rd
77b56db796c0ff46c3e78662ade77153 *man/test_hadex_data.Rd
9e1f4d231be0ac0a36f9d964a9f2dad6 *man/test_hdx_analyzer.Rd
febc430f91efaab88d4152bdbd334266 *man/test_houde.Rd
ac953e9e82b5019f3fc98f958c0bcf5e *man/test_memhdx_model.Rd
640e8bced6423af0c74032e842a8cf06 *man/test_semiparametric.Rd
92152617ee26063cf98359ab9cdca9c7 *man/truncated_lines.Rd
8159310daf9e0b5d20f4fad6ae5af925 *src/Makevars
4091581a6703b4bb8fbdf76a597d90d3 *src/RcppExports.cpp
faf14c7e530609296433ac9b25833c04 *src/get_deuteration_matrix.cpp
332173f20d20942c02019350ea4dcadc *tests/spelling.R
1e1d54edcd77102923fc4af57e323b5e *tests/testthat.R
b9752140b4d3b0d65d30f90ed55cb403 *tests/testthat/add_noise_to_curves.RDS
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97fd758fb66ebf64916a67a4c23fbeac *tests/testthat/add_noise_to_single_curve.RDS
853f737db694129331e5fbc3f1a3e010 *tests/testthat/curves_per_run.RDS
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9b4a2685fff5bcf1c76e94ab7498e7ff *tests/testthat/empty_power_result.RDS
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81b37871703f5a31ed6fe1b6cae74731 *tests/testthat/matrices.RDS
5ce0732bb7dd175e2a3ac91bead52823 *tests/testthat/matrices_close_times.RDS
4c86a5710b4ea30d31dc4bfd1ed44e93 *tests/testthat/matrices_markov.RDS
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54d595f8e0307198dd6db37b713fa76b *tests/testthat/paired_spectra_ref_10.RDS
dd03c9e9f1b2d32aa62a6319257108f4 *tests/testthat/power.RDS
52a366fd61cc8a31b275942cb70748ba *tests/testthat/power_summarized.RDS
124ad98c53bd99311fdb1249fb1b6217 *tests/testthat/spectra_3_states.RDS
2b5b1143b720611a636a4276cb390626 *tests/testthat/spectra_exp.RDS
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1b256ebeb2686b2a641bdc9ecacf5981 *tests/testthat/spectra_list1.RDS
9fc103c7ed2ef024b57c23f421e5d0ea *tests/testthat/spectra_noise_added.RDS
58b9f565e22fbaefb50e53600bb6978b *tests/testthat/spectra_noisy_intensities.RDS
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2f5dbbac88f0a0556016c84ee6186b8f *tests/testthat/spectrum_rcpp.RDS
4a2f20f70bda5c06636eb1974b805be9 *tests/testthat/test_create_experimental_file.R
20436ce022abacf1297cb1c24e9486f3 *tests/testthat/test_exchange_rates.R
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638f239a5626ba5693a906a082d36cc4 *tests/testthat/test_power.R
31ad92c9da7e03983e67bc622f937301 *tests/testthat/test_simulate_HD_exchange.R
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fb30552413a355f36a393c3153ccaa37 *tests/testthat/test_test_hadex_data.R
22212777d75df08ce9f96f60d996d458 *vignettes/Example_simulation.Rmd
b6b3635faab14bdf6c8f9f818fddc662 *vignettes/Simulation_description.Rmd
e8ff41d165136bc8aeda5b1e0211c6eb *vignettes/alg.png
56015e8e6524d35068556f3ecb876327 *vignettes/sim.png
