2135149eb94bfc48145313791b2a98d2 *DESCRIPTION
de94322df5e6625d5acc29a3e926118b *NAMESPACE
2bf5e1e419960e3287590f8d9bd52aab *NEWS
fca179d2c0eea6f084fb530a112822d0 *R/AllClasses.R
ed0066837f6a18cc17f057b87d79bfec *R/GitFunctions.R
ca0dd9c2507fab829a8af8a4634d2607 *R/Install.R
291d4f79b1fec8e626ca6c6a18fc8880 *R/SVNFunctions.R
e5c8fbbe5638275166986b7baa4b3cb9 *R/SwitchrParam.R
8d84125dce7b4ad54742241a27d0ec3a *R/Utilities.R
3abb03ef770659583cf6a56ebdb5f84b *R/accessors.R
ddb94ac7a98e3feda37f06b7f13c381b *R/allGenerics.R
bb57932d08d6c7ba83c20089fff15cfc *R/annotateDESCs.R
b1da0134adb4d3944a674f9c20402f26 *R/biocManifest.R
e2c62d72468d816efd8d11b27736424c *R/biocversion.R
62eeda861ddadf09a72f478375578b99 *R/cmethods.R
8220a535a4faaf480dd5f6a6340b3724 *R/conditionalCode.R
5af250f2fa8f40c6e753a626066e9495 *R/crandbtmp.R
f1a94dfb1ca8e770678d37511cd6da0f *R/dodeps.R
57c44742e56c0d745392bd9cf8cce949 *R/findCtx.R
905ca369f33b6d56dfd3403dd0358760 *R/flushSession.R
953a7fba4faf05b6157ab350aebd3a5e *R/head-methods.R
d841317a7e3af9777a9741be345bbd25 *R/lazyRepo.R
e266e1c0066cff0388f53a43760d5688 *R/loadGRAN.R
5c811c32f89ce32b7adec064d99a2b06 *R/loadManifest.R
0b011b5ad6e573fae5ee83a37654f926 *R/makeBiocVersions.R
f41a10677388af728ca5d742293e1d3b *R/makeCheckout.R
a73bf83a504fbfcaa534c442d0e6e80d *R/makeLibraryCtx.R
248716ae470c273eef5770a08e6a5720 *R/makePkgSourceDir-methods.R
809635964aedcfced1e0cf18818944a2 *R/manifest.R
27ef9c694fdc2936711386a564952521 *R/manifestFromGHOrg.R
dfec9ab496abccbcd97b6fb5e41f6202 *R/manifestFromLib.R
5701ce381929a8e9bbe0fa9eb59e3b76 *R/methods.R
b42b2ee084d47786c073d536843c0f6f *R/profile.R
40171d7e3146f623ce2786dddb96627e *R/removeLibrary.R
76e7bf591dbb5fbb2ccbe22e4504ba39 *R/retrievePkgVersion.R
b2e265eee91b0e1e66a7cc9afb8bdfd6 *R/saveManifest.R
c5cdadfdaacbc91e72e34d134fe78a3d *R/sessionInfo.R
fdb15b727481e5b5ca0f2ddda83dc083 *R/show-methods.R
797b2fe0aff93653b162a0c276ce2f51 *R/write_PACKAGES2.R
9a0176445fdff043d04135d4685b8012 *R/zzz.R
afceb6bf2134b019eb74bbffb26d40ee *README.md
b9324e785120fe450e529fada417fed0 *build/vignette.rds
07e22d80dfe82d96e6db385ec5652986 *inst/CITATION
03e02a3afbc1249b1275d565085cf17b *inst/doc/switchrvign.R
173ae1dc691e2242959ff4c6b43bf583 *inst/doc/switchrvign.Rnw
2283b1f5a7454f426ea7a9d1512b8021 *inst/doc/switchrvign.pdf
04a841f23adfeec02a2613b2211b5f0d *inst/examples/crandb.R
3eba8544a5c88ffbd0a2e76000fdf831 *inst/examples/lazyRepo.R
d51ac21df6b21219514f9411928b0afc *inst/examples/sessionInfo.R
c49c29960fa9b4fe5a5ec4d3aca5a2df *inst/localcheckoutest.R
6c081ce28ce9bcecf360eb409d3b2134 *inst/ropensciman.R
60e8e03162d886ea73b10cda90322655 *inst/talks/BarugLightning.org
f50e386731b0044713a15ce2143ec094 *inst/talks/JSM2015.org
0ecd3c3cf487e870314f382ba011c63d *inst/talks/JSM2015.pdf
1d043586b759a5e0b8863226b7c1df11 *inst/testlimma.R
21f61e2b04d849a72b2629420c8cb057 *inst/xtable.R
62516330c80370e935cd511530324fba *man/BiocDevel.Rd
84ebdad2a76acfb3791a7f95c070cb51 *man/BiocRelease.Rd
48d6c649ceb5033e3e0198fc4a3a8e4b *man/BiocSVNManifest.Rd
8f23e4e9f72c9074f008aa4c2082762d *man/BiocVers.Rd
9694268a329e3cd74486b203d4088350 *man/GithubManifest.Rd
2dd4d080d472222212c24242b20fa519 *man/LibraryProfile-class.Rd
f8a3b2cfe514651495b6c3edc1ee69a6 *man/ManifestRow.Rd
bb56123fe1c38a01b9ac81994f0f7149 *man/PkgManifest.Rd
24661d32190013182815f139740f29fa *man/PkgSource-class.Rd
bebe8f055ebbabc1ccb3635c067c1669 *man/RepoSubset.Rd
137c99b9bcff09116eea302ae193b26f *man/SessionManifest.Rd
2358bd0bad265a4825463b0e49a3feca *man/SwitchrCtx.Rd
d21fc3270014de7ff1bd02dff9d2941a *man/SwitchrParam.Rd
c3658f689829f75c3fdc12c6df532089 *man/addPkg.Rd
e4ea7d90618c55bc677f902c40c4b430 *man/archive_retries.Rd
a5ad124923fa9bebaeeb28bea5f77034 *man/archive_timing.Rd
94295cc618d312187f87b37aacf3abcd *man/biocReposForVers.Rd
e35aa5b356a536f746822037d11f6350 *man/branch.Rd
469f55b450f42579225d7113438e7ee5 *man/checkIsPkgDir.Rd
c000960ef0ba54183f24c1b415448b17 *man/cmethods.Rd
fca5088d683b9674d45f6b59f568f937 *man/cranPkgVersManifest.Rd
34ac91b8a145f27f59fef7f0b2121658 *man/currentCompEnv.Rd
a46ec916cd30f13577487702b4dc3ee4 *man/defaultRepos.Rd
716657131e4217288f73548acd9c2d75 *man/dep_repos.Rd
55aa7ef9321b960596960f321b47d38d *man/dl_method.Rd
143310de90df57facf4957137bb51f12 *man/errorOrNonZero.Rd
a36e30365d8c0c460f04d11732a2f03e *man/fileFromFileURL.Rd
ef360cfa6e9944bf57c3d8693583a581 *man/findPkgDir.Rd
6b9d18fb793b84f6c0d667190f1215bf *man/findPkgVersionInRepo.Rd
af5ced2de6133fd8a09335e8283da36b *man/findnewestpkg.Rd
1eb160ae3e9514a1a778f0a0728ceded *man/flushSession.Rd
b253a8d0d5eee5e0075d68deec3912c0 *man/full_libpaths.Rd
a47fb89a892a1c1cfdd5e71d9856b44c *man/getPkgDir.Rd
59a2dccb692b425515058a3b02eaff79 *man/gotoVersCommit.Rd
dab4ae0fc34cfcc5dd93be6bce2cc3b9 *man/headtail.Rd
0722045e5fb46b5f65a1963d5a91ba0d *man/install.Rd
217b357e54e347e031c0e536ca2210aa *man/lazyRepo.Rd
4c5b71971cb8ca1faa2cd58d9f0f74b9 *man/libManifest.Rd
de1f50ef349c6de6329a64d0d9ff9415 *man/library_paths.Rd
869a758c965476db0adf13f37dc1656f *man/librarypath.Rd
9fdd7a7ce97d833871b1e3937b1999ad *man/loadGRAN.Rd
d5f30cc92890559ab6d113d328203989 *man/loadManifest.Rd
1e11866fda2b9c2ae11bc23ec9227103 *man/locatePkgVersion.Rd
0160ad2682eba9254f1823c6189a8423 *man/location-methods.Rd
32ce461518e9a4c552429b6c5076f562 *man/logfun.Rd
a237c2f01287b0cf2eaeb16360c82303 *man/makeBiocSVNURL.Rd
40950f15fca5feb64847380d623a1eda *man/makeFileURL.Rd
05f6d5a0832a5e921a20f67e89dfaaed *man/makeLibraryCtx.Rd
e5d81a71fc00dccbbcbffc23bf063351 *man/makeManifest.Rd
f023a4074c51c6b397ecb896acb51577 *man/makePkgCheckout.Rd
32cd4e407524606af6bd1dd2d6a9206c *man/makePkgDir.Rd
fc6d1c13c2c4ee375f4138707c708414 *man/makeSeedMan.Rd
147f2990b6e2f03324c074c9e2a73f1d *man/makeSource.Rd
57155b4026662baa93e90e71db929ffd *man/manifest_df.Rd
55767164d45ddbde793e97c2378b410f *man/manifest_methods.Rd
d0b07309e9b9961ab0bd639e14c7c3ee *man/normalizePath2.Rd
e92ee0ee22956cbd6c5514fe0dc3ea5f *man/notrack.Rd
7b63148851e920a5431cfc155d8ae9d2 *man/nrow.Rd
d56fca252803e32f47c1259c48c6c878 *man/packages.Rd
4058c7a99df94be4e8370665fff6d240 *man/parseSessionInfoString.Rd
13d56d14e97e6f253b4eccad09dfa4fd *man/parsedSessionInfo-class.Rd
a2a6e319a8fd620635321648a8a8ff15 *man/pkgname.Rd
eed069b60b50ad1abee13fea995c641a *man/publishManifest.Rd
6f9c8333004911c31432ff317dbcf59a *man/rVersionManifest.Rd
a7ee531e3f06c1b8ddbc2ed1a14e2afb *man/removeLib.Rd
b9e0a0591a5b1dc8e89ef52d3dc79547 *man/sh_init.Rd
534bfd090fdea960b833b89bbdb77dc9 *man/shell_timing.Rd
fc52ece694c4f8b2974a22dc47e9f636 *man/subdir.Rd
3101bae3a9e653c40d1733d4d8f1c25d *man/switchBack.Rd
927bd0aac1fd6d81be2ffd8da66e3e66 *man/switchDeps.Rd
31306f858774901ae35fd1c342f28534 *man/switchTo.Rd
6b82a61c41d46d717f628b104f9e93c0 *man/switchrBaseDir.Rd
dd406a4530bf5fd1711a5987ceb13c1d *man/switchrDontUnload.Rd
de227e736605838898eda54f27a6049b *man/switchrManifest.Rd
485c6378409eaa59bab59dabf8e260e9 *man/switchrNoUnload.Rd
fa9ea66261f0d35374d37e9b43b206ba *man/system_w_init.Rd
a046c2128d8820e9961ed069d18c530c *man/updateManifest.Rd
d1da74a63b0eb35cce4ce51cbf7c15c5 *man/update_PACKAGES.Rd
552277cf05bbcb972ad03198f90cd2aa *man/versions.Rd
62b58c3a3b63e03293ae6bc24f34a77e *tests/winpath.R
173ae1dc691e2242959ff4c6b43bf583 *vignettes/switchrvign.Rnw
