06a676e40b2f7eb35b931bd56408329c *DESCRIPTION
d6ff32e86371ef26ca63914abfe1a6de *LICENSE
2bd8cdf6be1ad1a51a0fef6bbcf494a5 *NAMESPACE
fe344f4c4f99aa307f25807be4844402 *NEWS.md
d0ca7debd0eb19cde41aac24447bf15e *R/authenticate.R
870f27c8cd58d41ba4333f4b20ee7a1e *R/by_database.R
361b47d8c01a321f9bf156b20acc9009 *R/by_genes_or_panel.R
ccbd69e2aee568efcbe9d558e0ca3787 *R/by_patients.R
1d46e8f2868b6fd2a15a4dd9b6b68615 *R/by_samples.R
8bf0340e61f899803303052263886125 *R/by_studies.R
31090b01a05bd044cc36f9d5717b2f16 *R/cbioportalr-package.R
863f50f200ec75a51a39e85e52eb94cd *R/cbp_api.R
94999415de748448f3e082ea70421e5d *R/data.R
0459b2ca3556ea5fa8b15938a85acebe *R/genomics_by_sample.R
ff19873fa6cd5312e7822b5f5c0b0c34 *R/genomics_by_study.R
c6b31a0fdfaefeb134ecec34036bd33e *R/utils-pipe.R
182f2321411625fff14f70175061aa17 *R/utils.R
d99f5b82f57701c646248c91005739cc *README.md
1f72b3af3093fb603e96f467f442d19b *build/partial.rdb
4779db71a89aa1797d1d42a68d8e7165 *build/vignette.rds
2342db135a9be411121bc56e3d81766b *data/impact_gene_info.rda
cd0524715d52c271755ab3b793f16ade *inst/WORDLIST
42272f947d9c7b2ffd0bebba6b1b1ec9 *inst/doc/internal-structure.R
09f5c7fc0c325f146472aa5106893c87 *inst/doc/internal-structure.Rmd
75105d4e3392820e3262cd6256f08fa6 *inst/doc/internal-structure.html
df89d2d65ec299eb137a35f58d674f79 *inst/doc/overview-of-workflow.Rmd
c65cb066e6343b1be378165ad155efe8 *inst/doc/overview-of-workflow.html
f26808ce85e9d9c3372bdcbbee99c2f3 *man/available_clinical_attributes.Rd
a4662ddb65c4f36b43f90f13eef49380 *man/available_gene_panels.Rd
b071969cecbd2e514f5928a2ffa26d5d *man/available_patients.Rd
667080ed2266a8e543e70a58875a5c14 *man/available_profiles.Rd
989ae2d6c2a09a568d55fe9937d68e69 *man/available_samples.Rd
3db6023db57ae4ceceea84e63bb953db *man/available_studies.Rd
9ac17741483c3878e1a2c2608c6ddb10 *man/cbioportalR-package.Rd
b5c01a00779a0d9e7e947574a3a80a34 *man/cbp_api.Rd
d880326aac29a40a8c5a1876f612776a *man/dot-get_clinical_by_list_item.Rd
a59b743b345d02b8e0828e70a12dd7dc *man/dot-get_clinical_pat_by_list_item.Rd
6e4c56356bf401f43373479e43043a2d *man/dot-get_data_by_sample.Rd
687884da78e795635f3cc881cee55cc6 *man/dot-get_data_by_study.Rd
f4fbc8ca84baa6baac0e8b007d34d7fd *man/figures/cbp-diagram.png
099a1217aa1fd064893b01198b51897e *man/figures/html_object.html
97b4770c0d76c1ef753379afce5b743e *man/figures/logo.png
4e5e0f6a7c9c912d6d579afbc6f8acc1 *man/figures/readme-cbp-diagram.png
f634a0681343afaefb41f97ffbeaee76 *man/figures/svg-cbp-diagram.svg
c58a270f0260cd112629c406b8aae3b1 *man/figures/svg_object.svg
6237d4eb7f8ebc35327fe88420fc8f81 *man/get_alias.Rd
7da6efd9d7e42000c51e2e325eb06b83 *man/get_cbioportal_token.Rd
087a5f7badea5b94ac41d9cb814e66f9 *man/get_clinical_by_patient.Rd
996475d6ecc0e3d8fc23f3de0113a26a *man/get_clinical_by_sample.Rd
f52b28306364c095e9a98c1735915057 *man/get_clinical_by_study.Rd
c938ffb28e4f1848abe6bb8a711b0ab8 *man/get_cna_by_sample.Rd
1d8358b8c4983635a02c96d359f57944 *man/get_cna_by_study.Rd
1f4f391e00ef3eaa1ae4b50053a850a3 *man/get_entrez_id.Rd
58bd41c5bac3b6a7e0ea895d1ed23368 *man/get_fusions_by_sample.Rd
7fc809e6bb56c89255bc0236387ea99d *man/get_fusions_by_study.Rd
a741e5b6a7a503bde6664e33483252e5 *man/get_gene_panel.Rd
36dbdeda13eb6fe1bfb40607d35e21d4 *man/get_genes.Rd
25d389f728e1c7d91c811f6e98e1ea0d *man/get_genetics_by_sample.Rd
cb3497b5eb692f46e699b4bdcc6cf9ed *man/get_genetics_by_study.Rd
cc8fd6f33dc8a471bf96a8386776bcd8 *man/get_hugo_symbol.Rd
35689e22bb7b48f62064497e9e1a32f0 *man/get_mutations_by_sample.Rd
eea207340f473a0bd0de82caf75b7167 *man/get_mutations_by_study.Rd
bb31ec86192d3b25d561d871ec8b7227 *man/get_panel_by_sample.Rd
d699d5f0fc9f287d8ad44d5398a1cef9 *man/get_samples_by_patient.Rd
5d4db05d4438acb2c31d03b9bc46d32d *man/get_study_info.Rd
14f77f7e0ca6069df4c254d2f2a36c79 *man/impact_gene_info.Rd
da0f3385ef6f4902c87c367bc83517c0 *man/null-default.Rd
cb53cf15b7420f44d43678a24bbdbe6a *man/pipe.Rd
b7c7e3d88c6a1bbe5479c6ce0676637e *man/set_cbioportal_db.Rd
2f4450db8f64e09baf6716974af48cec *man/test_cbioportal_db.Rd
0622a97a2aaa3c342f09636052c2d7f5 *tests/spelling.R
d7ebc0946a007833f2dc17ec2026c863 *tests/testthat.R
167fbb1a3e2ff89291792a20deea0b6d *tests/testthat/test-authentication.R
3315b3426c2cd5bf473ea460bd30d910 *tests/testthat/test-by-db.R
bfd0b8e6d25b0268f9eaa3936fc29d93 *tests/testthat/test-by-patient.R
f9938942efdc43fd570c09aa3ce6d143 *tests/testthat/test-by-sample.R
97b45c55dac044d2bf47c4087632782f *tests/testthat/test-by-study.R
3c9828325f6a08e31ef4282e9bc0c860 *tests/testthat/test-cbp_api.R
c09a0b4b10e43a4c4fd697575c68d2a7 *tests/testthat/test-genes.R
206b83a8ca960f097ac2a1293ee1c30a *tests/testthat/test-genomics-by-sample.R
d65df5e6a90f143481f7a209cad1a5c6 *tests/testthat/test-genomics-by-study.R
09f5c7fc0c325f146472aa5106893c87 *vignettes/internal-structure.Rmd
df89d2d65ec299eb137a35f58d674f79 *vignettes/overview-of-workflow.Rmd
ed44a02ffb49f5db6101093c52fca6b4 *vignettes/precompile.R
