90f08288f9d5d9868b9e40249e2508fd *DESCRIPTION
ab074b63ac261f17d3b7d1fa507ef527 *LICENSE
e2d7d74878e00cedef605cd9ee520d64 *NAMESPACE
030846b30456c13086809aa7c6496727 *NEWS.md
714bf1ed90c453853aecef90032d8b24 *R/0a_backbone.R
aa92be0dae1a7bbfa083d7eeff26b0ca *R/0b_modnet_pieces.R
61eea6176cb08ce3f2c21381f783596f *R/0c_backbone_lego.R
38b43bd726adbe8b5bfdc696348f655c *R/0d_backbones.R
c4bae76d67d224860f3fefb7979c06a9 *R/1_initialisation.R
d4d838e315163957e07d8fd135988535 *R/2_tf_network.R
c18526bc17e540282f9778b6539c639b *R/3_feature_network.R
8a5b99ac6e6f3e3f619b4f4f5dc64304 *R/4_kinetics.R
3e794ad11b491222029d7be648b547e7 *R/5_gold_standard.R
ebc2d293b91de4c1fdee78a90822c021 *R/6_simulation.R
bb486b1fe57a333bc9bc7c492d133d15 *R/7_experiment.R
fbe4ecf016e482a9e1700a0031d0e10e *R/8_convert.R
8d0984d70c0f9619da37eef9b71bbd3e *R/caching.R
a344f630869e0f3262197c087cf38e9f *R/colour_brighten.R
3cc5289e6a1962fd0c0fce7760d716b3 *R/combine_models.R
e52a16d0f505e49ca6d04314c6673878 *R/data-example_model.R
7c1087561fce3086b9ec787687154e16 *R/data-realnet.R
048d66dc50d010ae27bb446e7db571b3 *R/dimred.R
c1872d68becc98e3321561294be942d3 *R/generate_dataset.R
cb4261bdf20cfde4adb52d81763afaa6 *R/generate_partitions.R
ab4619232c210c2efeaaaeecbfd1132d *R/package.R
eb505b1ca0669f5a8610a3e4a1d547c5 *R/plotting.R
51b5b8e13fd77db94bb73c1e834d82bb *R/random_generators.R
7fde42e5d7a970719855e5eaa59aac7c *R/reexports.R
d061ae4058f0f9367f7874c12d5f075d *R/simtime_from_backbone.R
a44ac3c62c506766ef1b9d33adc0ed11 *R/timings.R
4c491553d8b2c935c7c46d49bbb0fafb *README.md
e93c1991ef162571652bfcaf325e931f *build/vignette.rds
94a4e1a797d30aea9433978d8bb33592 *data/example_model.rda
6ccb0ab640c17865997eff2c93bb22d8 *data/realcounts.rda
577838d68401ca076b3f6c8a877c8754 *data/realnets.rda
394e967551d34e8a1c473fe0db09cb08 *inst/CITATION
161a4ed8eab4b792ceb7f6fff4a39853 *inst/doc/getting_started.html
7b1f5d1ef3f996bb3b77a1d8c3705439 *inst/doc/getting_started.html.asis
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c1f654805bf97c7e791075ee70a0e546 *man/backbone.Rd
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1c124ff83831adf37390c0fa118165c6 *man/kinetics_noise.Rd
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6c744b0c9b9eda34f49dfdfba625f080 *man/plot_simulations.Rd
f66b8d8694057b0a60bb3471ef0d1f06 *man/plot_summary.Rd
cd8d87806cb96cf56dc1537962d26c46 *man/realcounts.Rd
9e5765959277718ec29aba4ae845079a *man/realnets.Rd
4354ce22b9a6730ca0b015ca345f5aa9 *man/reexports.Rd
ab58a0bb842111b125b50b0618be43f5 *man/rnorm_bounded.Rd
7dbb035de7c4dbfa57227dd3be386bb5 *man/runif_subrange.Rd
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13b0f30e310026310b906e753fcd2b34 *tests/testthat.R
5963ac4d959ecb6d39f33226d4758897 *tests/testthat/7_experiment.R
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df5c4c6695aef03a991d85c43af6246f *tests/testthat/test-combine_models.R
71fde529c34c080e01f5d136ff152b0a *tests/testthat/test-generate_dataset.R
5d0f11ddd2ee12e7c7f56f6d8fd5fe15 *tests/testthat/test-generate_partitions.R
7b1f5d1ef3f996bb3b77a1d8c3705439 *vignettes/getting_started.html.asis
c213465810c96cc80206e4f6d7701d2c *vignettes/installation.html.asis
