72aea4a96b80920a94bc409c324e7800 *DESCRIPTION
7dbfe1bbe9222d6690733488c1bcc011 *NAMESPACE
e962777367051cd9f95eba4f19feed06 *R/aio.R
ff980d1ceb1c1606daa599e8ddcb93df *R/bmh.R
dcd0ef1f20d0254e1ce9fad0b8287ca1 *R/co.R
00bf7c27af419916d03b2c5bea34bffd *R/cs.R
894f999aaa4841d0560ec526c7158437 *R/fastDist.R
a7942f63193e3a03caba7220f6c00aff *R/hh.R
509a198f45506ad70996998a13558e2c *R/hsphase.R
a351e1822bc33cf5130177983b3c3e41 *R/hss.R
b2456c0ebf8f3114ede17c0f2de7f501 *R/imageplot.R
3dc9e07c320cf3d985efeae93e9c31c5 *R/impute.R
49f1e45906f9f212f51823b6001fa769 *R/maf.R
e2d05e5008ad53287a13439146b0f898 *R/namingInferedPedigree.R
458fbcbb16b8c2045994946b35522f73 *R/ohd.R
186a5af1d9e870b9ae6ea969d1937dfb *R/ohg.R
06fc3e6de1b3cb05773de995b4cd6a45 *R/ohplot.R
c0e7c2fa7a858ce4cdeec92dbc3b247f *R/para.R
84909efcf123d3c2a2b2b5960e29b23b *R/pogc.R
288eb0f5745392408021300cafd3d956 *R/prCalus.R
202057840835cbfc48229625e9392417 *R/prManual.R
d8cc51b192ed3ddfb8e765f35dc185cf *R/prSimple.R
8d68c158412df752247e8442bd449d5e *R/rplot.R
01cdc567fe62afa2ca071735550712ec *R/rpoh.R
d43bc86c6d6c90f3725863a10299dcd0 *R/rpohhsphase.R
f0727c19ed0e27419f830bb1563dcb7f *R/simulateHalfsib.R
8451d2c4e1abb32f222d4a5b56aa7eea *R/ssp.R
27b685f0255367940d271ced8614ee17 *build/vignette.rds
168c3c8ce11ecb4ca196ac0978a4953c *data/genotypes.rda
dcfad65640df58767f04322d094f6a84 *data/map.txt.gz
6e2adec868a9c37f3b6d2ae26be8ca73 *data/pedigree.txt.gz
7760e822405e2eded1be3d91e2595490 *demo/00Index
19b72c690e50b30af50a3decd4c93575 *demo/hsphase.R
1cca785a3bc71987ecf67b80efdc72e7 *inst/CITATION
bbb1c5781055f42319dfe68d85b99e48 *inst/doc/hsphase.R
b896622ffcb3a746ebdb122a6184ab23 *inst/doc/hsphase.Rnw
01e88dff62ec6dad95ee3422942556a5 *inst/doc/hsphase.pdf
860d47c03818118a115f335e02aff3ef *man/aio.Rd
324a7288d439d4470f5990fd78459087 *man/bmh.Rd
01350adc81e7a109d46ba879f4925158 *man/co.Rd
84f578079c8a61ec64c25a6bca8c8cdb *man/cs.Rd
11a24ab5128c93556e677126a23a08f5 *man/genotypes.Rd
92972ecd9547ef02fd9a4918911c9e38 *man/hbp.Rd
231c5acc4b08fee565d1a5e864767cce *man/hh.Rd
f23bbe697c9d3936433dac68e08f4672 *man/hsphase-package.Rd
89c744a42509dd7320a3f55dac7f9624 *man/hss.Rd
6a1d96452657f3e84cd836e043b6bd40 *man/imageplot.Rd
fee831fc2456f4e8add7dca0793f713c *man/impute.Rd
daa4439ee544cb4b5737f372a96a7fef *man/map.Rd
ba40eab5e6cfdd14420368a98a02f133 *man/ohd.Rd
f55a44f63e4937413bfea7cf91d970d8 *man/ohg.Rd
a3a1225e9ac31353689066717bfd595e *man/ohplot.Rd
63f39a530e4ba6c762fe2f7958a32a33 *man/para.Rd
fb1ed6acca0b790da654fff176475e6b *man/pedigree.Rd
34c5180403191597e61c503733c3e44e *man/pedigreeNaming.Rd
7effd39eccbd31df391d41a6a5dd65e9 *man/phf.Rd
b50fe816dd33c0f9fc80ba8fb0766399 *man/pm.Rd
aae35fe6cae8b43fbfd0503a84b9f03b *man/pogc.Rd
b8c4dc05fe01d41b2e9261deb8eab3da *man/readGenotype.Rd
7b2e908f1d24aa6df4e6037f1cd8f4b8 *man/recombinations.Rd
ba3868bdfb1b9ae56efd22d51d1639af *man/rplot.Rd
8874d121ec1e0f815ca9a896f1f0181f *man/rpoh.Rd
4070638740bcc62f05ed2d81868fd6f8 *man/ssp.Rd
a294175a12318779b5d3c81a25a25943 *src/FastDist.cpp
241c74748b7190e58bbfb3dc6ce39e8c *src/FastDist.h
38d17c253bf4187c8da7dd5821bc9e5d *src/MAF.cpp
411580eba1855b456b684f9c07ceb2e9 *src/MAF.h
2bea28849539a5a934dc0f86b50e205c *src/Makevars
a73031cbe7d6aaf0bd22e20f6526977d *src/Makevars.win
c696be6cf2c23a93a594ee6527448f08 *src/Ohd.cpp
342a62cc195a0719ba4084d9ae56da77 *src/Ohd.h
69d6dba04e4abb81254404a5ab512314 *src/TypeConversion.cpp
1dd0bf5fe3dbb35a02c71cd36bfe7449 *src/TypeConversion.h
a1ddaea335f233b0cdb1a5776acab0fe *src/block.cpp
ae464d5d08696832a7af845457e7d807 *src/block.h
96aacc8e4976dd51b1bae2d0e909fd23 *src/block4Phase.cpp
d0b3cb9ed237f674658b212aaf5e5f38 *src/block4Phase.h
b6db2f8b5484556fc0d3d211f3fe2715 *src/co.cpp
6618f9b5b9bc98c0c5373b4a24e9e8b9 *src/co.h
ac1ce5593ba91ca09bee5d9f9c7a4fac *src/diag.cpp
e56785e158a1a4505fa8562eab7b81b2 *src/diag.h
740592092a7d36e147a03db85facdde8 *src/hsp.cpp
5396d87796e8d0566a87319a55820f98 *src/hsp.h
4c5fc0aca52a73776a980304f46d874d *src/main.cpp
ab2703828920c9bf459344fce6295b63 *src/memory.cpp
6fc989105df8e19021ff908f61c98db8 *src/memory.h
00d780ec7a77d2000f51f599a5407a4e *src/oh.cpp
db89ed7e5ed5f3da77bafcca0f50e69b *src/oh.h
ec2d32637d29a49f8472cd9b2b860fdb *src/ohg.cpp
47ce2dc11f764ccd36f01ee731436114 *src/ohg.h
0ac57dde11b7f0567b8de0490080fcbb *src/ohp.cpp
bc61bfe2036dd2081dc8737e64cf623c *src/ohp.h
e51b7a6d63882166def909031e26978a *src/swDetect.cpp
0642a1452f22181d6c996af216f6c391 *src/swDetect.h
b896622ffcb3a746ebdb122a6184ab23 *vignettes/hsphase.Rnw
