63f39a803519738ac7c3f965d818e46a *DESCRIPTION
dbb4a9c848e6600ab0aaf53145957f90 *R/add.everywhere.R
25200bc9ff6bc2fdc470bca247668a66 *R/allFurcTrees.R
ec1d00099c5178ab73fdaec44319eab7 *R/anc.trend.R
0676ff6e0a9c20313ef37088dcc65a63 *R/branching.diffusion.R
08a32fd42f9bc68951ba306d203d9c1e *R/brownie.lite.R
5397acaca512edd294e1b283422ecd84 *R/drop.tip.simmap.R
f18d50ae6592f1442ff19f5b9c090ef0 *R/estDiversity.R
79d624de43c18d2791cac96c9409662f *R/evol.rate.mcmc.R
f37516229ae523d9cb86beadc4bdfbc4 *R/evol.vcv.R
0b4d050fab5267aea8d19e6c94b78621 *R/exhaustiveMP.R
bfe9d45e7a126e26d4ea0c10e7851350 *R/fastBM.R
8e91541bae0c978f036cfcb34636a1ef *R/fitDiversityModel.R
b0aba8f8d90319b1166b6da0cf7b0f03 *R/ltt.R
a9528177acee4a3fbec5bba50de4b621 *R/make.simmap.R
23b9e915f9fc8b9c46d81c573afbbedc *R/map.overlap.R
c5fcef78f144ae6d576e9d767a035815 *R/mrp.supertree.R
3c404c48fc91c9233120cda8613f483e *R/optim.phylo.ls.R
ee5133ee3d974763bd798ce375781879 *R/phyl.RMA.R
b98540191c65f71878311c488b03b833 *R/phyl.pairedttest.R
a0a23f3b8324fdfe6ee21fcd2d129f3f *R/phyl.pca.R
05ba6f27399450d842fbd3516186d1da *R/phyl.resid.R
f1fe30a068d21211aaaa2f18c242b632 *R/phylANOVA.R
3600331c851c0a52ac115d0988404976 *R/phylomorphospace.R
5e7113cb04f6c90da6a22eb2ff705d35 *R/phylosig.R
01f9ce3df1c3a993c5241a92efe02eb9 *R/plotSimmap.R
f6c203f120a423400fca2908e8f47758 *R/plotTree.R
20d93417514de8d6caf78fe4f71fc33d *R/read.newick.R
7ed3c7ec495d6bec8d4e8452af266cec *R/read.simmap.R
bfd66836ee01bf8e3df4f8ddaa0ede66 *R/reroot.R
0c97c26bfffc28038056dc574f37378a *R/starTree.R
4d55481533d046d11312c9bcaebc7a28 *R/treeSlice.R
f8b9c547e0cd28c52e7a2ba438e9227d *R/write.simmap.R
3e50187f2127403fd11f24752f9b3e69 *man/add.everywhere.Rd
b0eafcffbfbf345d1ed742d17c722aea *man/add.to.branches.and.nodes.Rd
f08c8bcb097196bc82ec96391b2261ac *man/allFurcTrees.Rd
1c4c952bed7c13c404f1ed98dbffac65 *man/anc.trend.Rd
48b5c6db46d336f13d6ce3fff88a840b *man/ave.rates.Rd
5ac778138ac933d958fe61bc1a6bfa99 *man/branch.and.bound.Rd
d6fd7b00a5a8d70cdb65c89a209587b6 *man/branching.diffusion.Rd
d199339437769d792ea08e1b179a779f *man/brownie.lite.Rd
6633642fb398b6475e2976953da0ecc1 *man/compute.ancestor.nodes.Rd
1ff3907a997da795bfa40fec3180ced6 *man/drop.clade.Rd
6a9ef08ecda26981b173a4896a0adeaa *man/drop.tip.simmap.Rd
0de7bc8936fa00db7f49c0f62cb04ebd *man/estDiversity.Rd
6b01ec7c77877d870626041e5769d41a *man/evol.rate.mcmc.Rd
dd7cd1f6e0d3282b645786f4fc3320cc *man/evol.vcv.Rd
019f47d8d17bc9c90af0250bde415d72 *man/exhaustive.search.Rd
5c8d4ed5b3f9342c6fc8f2374f8a15f4 *man/exhaustiveMP.Rd
330abef3f0c4d1f6735426500178fcc1 *man/expm.Rd
b5585d0fcf0bf8fe7cc30ee6149312c7 *man/fastBM.Rd
31d00fc7bf8e49889652f1b22a79ecbb *man/fitDiversityModel.Rd
f22f453a75efa11040a4013c6abc13ef *man/gammatest.Rd
7a19a54474fe4e14a9840c2d07dd15c4 *man/lambda.transform.Rd
e73a888a30532e6bc9fb776d315afb87 *man/likelihood.Rd
9ff9da65401ef83bda5a8d14722b91f0 *man/likelihood.lambda.Rd
27f20dcd9b58b7eb42576c4f7632046e *man/ls.tree.Rd
b48cda8e21d017dbdd87e4000b3fc0b5 *man/ltt.Rd
422efc4d449c3b6b0e0f63a3c5ffbf8e *man/make.simmap.Rd
654594a7b47e18227be93762320a8136 *man/map.overlap.Rd
3685c1079d5cd34abd341a976fd3e508 *man/minSplit.Rd
909d76cc3638b95d73339231f8162480 *man/mrp.supertree.Rd
71fd39b6a73adcdb81f2b0f314a7c515 *man/nodeHeights.Rd
1733815b7cad7be3d2a0bb9a60909944 *man/optim.phylo.ls.Rd
1ca4d82f409afbe7a44a8dbbfdab343f *man/paste.tree.Rd
57343ff977909677eda2cc36eb4a8f0f *man/phyl.RMA.Rd
95f4f4e3c0187c80cc36026a4099443e *man/phyl.pairedttest.Rd
8291c3d46b7d402d7ecbda0ebeeaf6f1 *man/phyl.pca.Rd
573b37f4172dd42466ba02bb05799d8e *man/phyl.resid.Rd
388f627eb65b1a6d59c09523540e01be *man/phyl.vcv.Rd
aa02c813804500eae9318f2b25d0ce6b *man/phylANOVA.Rd
b744f804067f9b539b5b99b19e2ecb82 *man/phyloDesign.Rd
811cbc24ca036c7e87a3b3d9cc0e6f40 *man/phylomorphospace.Rd
0301aa8b25faeeb37fd8fb42dc1cab2e *man/phylosig.Rd
54f4a356cb50be2d53ddd862ec2d2c0d *man/phytools-package.Rd
db81c86953120db6c2b3ee6fa0888ff1 *man/plotSimmap.Rd
4b1f69e185fdad73a7a9ccd675c88877 *man/plotTree.Rd
40a717ef8d2ebd5c5b276e631faa8b55 *man/posterior.evolrate.Rd
11ad2de61042ffa0da6ad372bf53f453 *man/read.newick.Rd
ac63b815278793d07597a60d7e31ea48 *man/read.simmap.Rd
ee6a3977f54c6184e50a448aed57ce3b *man/reorderSimmap.Rd
7981c80df59acd2eea931b03faea6b0e *man/reroot.Rd
cf9be594b776265680e218d6f0b9cc06 *man/rstate.Rd
e1101897015eb1b9353fc034d9effdd9 *man/splitTree.Rd
c45258dcbe4190647db68c10c5b3d529 *man/starTree.Rd
cbac1b2640914a302b55dccca4b1db00 *man/tTests.Rd
3e79a75bcc48bf274c55e5253852f6a4 *man/treeSlice.Rd
853c890430813b416aadb9c96bd316a2 *man/whichorder.Rd
b70f7e5ec31a7d3f85861c544258f1f2 *man/write.simmap.Rd
