# Generated by roxygen2: do not edit by hand

export(analyzeClones)
export(defineClonesScoper)
exportClasses(ClonalAnalysis)
import(methods)
importFrom(alakazam,baseTheme)
importFrom(alakazam,checkColumns)
importFrom(alakazam,getDNAMatrix)
importFrom(alakazam,groupGenes)
importFrom(alakazam,pairwiseDist)
importFrom(alakazam,progressBar)
importFrom(alakazam,writeChangeoDb)
importFrom(doParallel,registerDoParallel)
importFrom(dplyr,"%>%")
importFrom(dplyr,arrange)
importFrom(dplyr,arrange_)
importFrom(dplyr,as_data_frame)
importFrom(dplyr,bind_cols)
importFrom(dplyr,bind_rows)
importFrom(dplyr,combine)
importFrom(dplyr,data_frame)
importFrom(dplyr,data_frame_)
importFrom(dplyr,desc)
importFrom(dplyr,do)
importFrom(dplyr,filter)
importFrom(dplyr,filter_)
importFrom(dplyr,funs)
importFrom(dplyr,group_by)
importFrom(dplyr,group_by_)
importFrom(dplyr,mutate)
importFrom(dplyr,mutate_)
importFrom(dplyr,mutate_at)
importFrom(dplyr,n)
importFrom(dplyr,one_of)
importFrom(dplyr,select)
importFrom(dplyr,select_)
importFrom(dplyr,slice)
importFrom(dplyr,summarize)
importFrom(dplyr,summarize_)
importFrom(dplyr,summarize_at)
importFrom(dplyr,ungroup)
importFrom(dplyr,vars)
importFrom(foreach,"%dopar%")
importFrom(foreach,foreach)
importFrom(foreach,registerDoSEQ)
importFrom(ggplot2,aes_string)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_rect)
importFrom(ggplot2,element_text)
importFrom(ggplot2,geom_histogram)
importFrom(ggplot2,geom_hline)
importFrom(ggplot2,geom_polygon)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(iterators,icount)
importFrom(lazyeval,interp)
importFrom(stats,density)
importFrom(stats,dnorm)
importFrom(stats,kmeans)
importFrom(stats,sd)
importFrom(stats,uniroot)
importFrom(stringi,stri_length)
importFrom(stringi,stri_split_fixed)
