Package: RNeXML
Type: Package
Title: Semantically Rich I/O for the 'NeXML' Format
Version: 2.4.5
Authors@R: c(person("Carl", "Boettiger", role = c("cre", "aut"),
                    email="cboettig@gmail.com", comment = c(ORCID="0000-0002-1642-628X")),
             person("Scott", "Chamberlain", role ="aut", comment = c(ORCID="0000-0003-1444-9135")),
             person("Hilmar", "Lapp", role = "aut", comment = c(ORCID="0000-0001-9107-0714")),
             person("Kseniia","Shumelchyk", role = "aut"),
             person("Rutger", "Vos", role = "aut", comment = c(ORCID="0000-0001-9254-7318")))
Description: Provides access to phyloinformatic data in 'NeXML' format.  The
  package should add new functionality to R such as the possibility to
  manipulate 'NeXML' objects in more various and refined way and compatibility
  with 'ape' objects.
URL: https://docs.ropensci.org/RNeXML, https://github.com/ropensci/RNeXML
BugReports: https://github.com/ropensci/RNeXML/issues
License: BSD_3_clause + file LICENSE
VignetteBuilder: knitr
Suggests:
  spelling,
  rdflib,
  geiger (>= 2.0),
  phytools (>= 0.3.93),
  knitr (>= 1.5),
  rfigshare (>= 0.3.0),
  knitcitations (>= 1.0.1),
  testthat (>= 0.10.0),
  rmarkdown (>= 0.3.3),
  rlang,
  xslt,
  covr,
  taxadb
Depends:
  R (>= 3.0.0),
  ape (>= 3.1),
  methods (>= 3.0.0)
Imports:
  XML (>= 3.95),
  plyr (>= 1.8),
  reshape2 (>= 1.2.2),
  httr (>= 0.3),
  uuid (>= 0.1-1),
  dplyr (>= 0.5.0),
  lazyeval (>= 0.1.0),
  tidyr (>= 0.3.1),
  stringr (>= 1.0),
  stringi,
  xml2
Collate:
  'S4-utils.R'
  'classes.R'
  'add_basic_meta.R'
  'add_characters.R'
  'add_meta.R'
  'add_namespaces.R'
  'nexmlTree.R'
  'add_trees.R'
  'character_classes.R'
  'concatenate_nexml.R'
  'constructors.R'
  'deprecated.R'
  'get_basic_metadata.R'
  'get_characters.R'
  'get_level.R'
  'get_metadata.R'
  'get_namespaces.R'
  'get_rdf.R'
  'get_taxa.R'
  'get_taxa_meta.R'
  'get_trees.R'
  'internal_get_node_maps.R'
  'internal_isEmpty.R'
  'internal_name_by_id.R'
  'internal_nexml_id.R'
  'meta.R'
  'nexml_add.R'
  'nexml_get.R'
  'nexml_methods.R'
  'nexml_publish.R'
  'nexml_read.R'
  'nexml_validate.R'
  'nexml_write.R'
  'prefixed-uris.R'
  'simmap.R'
  'taxize_nexml.R'
  'tbl_df.R'
  'utils.R'
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.0.9000
X-schema.org-applicationCategory: Data Publication
X-schema.org-keywords: metadata, nexml, phylogenetics, linked-data
X-schema.org-isPartOf: https://ropensci.org
Language: en-US
Encoding: UTF-8
